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Web Apollo: a web-based genomic annotation editing platform
Web Apollo is the first instantaneous, collaborative genomic annotation editor available on the web. One of the natural consequences following from current advances in sequencing technol...2485 days ago
ZENBU: a collaborative, omics data integration and interactive visualization system
ZENBU is a data integration, data analysis, and visualization system enhanced for RNAseq, ChipSeq, CAGE and other types of next-generation-sequence-tag (NGS) based da...1959 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...a Galaxy cluster in the EC2 environment A webpage that has the same information in text form, and is the basis for the screencast The iPlant Collaborative, an NSF-funded project to cre...3791 days ago
Commercial and public next-gen-seq (NGS) software
...ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons. TopHat is a collaborative effort between the University...3531 days ago
National Workshop on Data Deluge in Biology: Use of High-Performance Grid & Cloud computing
...large-data centric computing and the need to address the challenges due to data deluge in biology. This workshop is also aimed to identify new collaborative research possibilities in thi...3811 days ago
C-DAC launch supercomputing facility "Param Bio Blaze" !!!
...for research on Malaria and understanding how the disease spreads- Collaborative work with Tata Memorial hospi...ues from breast cancer patients- Designing anti-cancer molecules, a collaborative research with the University...3740 days ago
Structural polymorphism analysis from NGS data
...oinformatique) which has computational facilities and expertise in NGS data analysis, and will benefit as well from national and international collaborative networks (Aplibio http://www....3960 days ago
Postdoctoral position in bioinformatics @ Sweden
...ient in programming (e.g. Python/Java/C) and comfortable with Unix/Linux systems. Interaction with experimental biologists is central and good collaborative skills are therefore importan...3959 days ago
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Installing ggplot2 and its dependencies on Ubuntu !
...onditions. Type 'license()' or 'licence()' for distribution details. Natural language support but running in an English locale R is a collaborative project with many contributor...1562 days ago
Commands to install conda in Ubuntu !
...untries. The following packages are included in this distribution that relate to cryptogr aphy: openssl The OpenSSL Project is a collaborative effort to develop a robust, c...1523 days ago
ZENBU: a collaborative, omics data integration and interactive visualization system
ZENBU is a data integration, data analysis, and visualization system enhanced for RNAseq, ChipSeq, CAGE and other types of next-generation-sequence-tag (NGS) based data. ZENBU allows for novel data exploration through "on-demand" data processing and interactive linked-visualizations and is a...Tags: ZENBU, collaborative, omics, data, integration, interactive, visualization, system
1959 days ago
Apollo: First instantaneous, collaborative genomic annotation editor available on the Web
Apollo is a plug-in for the JBrowse Genome Viewer. In addition to genes and pseudogenes, users can annotate ncRNAs (snRNA, snoRNA, tRNA, rRNA), miRNAs, repeat regions, and transposable elements; each annotation type has its own configuration of the ‘Information Editor’. ...Tags: Apollo, collaborative, genomic, annotation, editor, Web, genome
1812 days ago
Comment on "List of gene ontology software and tools"
Chen EY, Tan CM, Kou Y, Duan Q, Wang Z, Meirelles GV, Clark NR, Ma'ayan A. Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics. 2013;128(14). http://amp.pharm.mssm.edu/Enrichr/1504 days ago
Comment on "Various scholarships around the world !!"
...Postdoctoral Fellowships for Indian Researchers is to introduce scientists and engineers in the early stages of their careers to international collaborative research opportunities, there...2674 days ago