3954 days ago
Tools to detect synteny blocks regions among multiple genomes
...evolution. It can also aid in identifying uncharacterized genes, putative regulatory elements and novel structural features of study species by comparing to a well annotated reference...2625 days ago
Bioinformatics tools for telomere to telomere assembly !
...he sequences and removing potential chimeric sequence variants (Yuanyuan Cheng @Yuanyuan929)● svpack – tools for filtering, comparing, and annotating structural va...1006 days ago
Frequently used bioinformatics tools for viral genome analysis !
...e classification using exact alignments. Wood, D. E. & Salzberg, S. L. Genome Biol. 15, R46 (2014). MUMmer: Versatile and open software for comparing large genomes. Kurtz, S. et a...1062 days ago
List of comparative genomics resources !
...og/paralogon information. EVOG -- evolutionary visualizer for overlapping genes Analyze the evolutionary process of overlapping genes when comparing different species. GNAT...692 days ago
Common methods to discover tandem repeats
...and overall composition. RepeatMasker: RepeatMasker is another software tool that can identify tandem repeats in DNA sequences. It works by comparing the input sequence to a datab...438 days ago
Steps to find palindrome in genomes !
...e palindromic regions. By mapping these reads to the genome, palindromic regions can be identified and characterized. Comparative genomics: Comparing the genomes of related specie...438 days ago
Calculate the significance of the difference between two trends
...c details of each step will depend on the type of test you choose and the software you use to perform the analysis. The most common methods for comparing means include: MethodsR...433 days ago