Managing and Analyzing Next-Generation Sequence Data
...cs and infrastructure demands. Centralized Facilities newly facing this challenge need to anticipate time and design considerations of necessary components, including infrastructure upg...3648 days ago
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TULIP - The Uncorrected Long read Itegration Pipeline
...eel) TULIP currently consists of to Perl scripts, tulipseed.perl and tulipbulb.perl. These are very much intended as prototypes, and additional components and/or implementations are li...2364 days ago
Ra assembler - a de novo DNA assembler for third generation sequencing data
...(FER), Ruder Boskovic Institute (RBI) and Genome Institute of Singapore (GIS). Ra is in development since 2014 in the form of several separate components that used to be run individua...2330 days ago
SEX-DETector: A Probabilistic Approach to Study Sex Chromosomes in Non-Model Organisms
...mapping of the reads. A full documentation on the pipeline can be found here. we recommend Trinity for the assembly. Trinity components should be merged with ca...2176 days ago
TULIP - The Uncorrected Long read Integration Pipeline
TULIP currently consists of two Perl scripts, tulipseed.perl and tulipbulb.perl. These are very much intended as prototypes, and additional components and/or implementations are likely...2191 days ago
GenoViz: Visualization software for genomics
GenoViz provides software applications and re-usable components for data visualization and data sharing in genomics. Our flagship product is Integrated Genome Browser (IGB).For more inf...1960 days ago
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