3669 days ago
Integrative Genomics Viewer (IGV) tutorial
...ad Center allows you to view several types of data files involved in any NGS analysis that employs a reference genome, including how reads from a dataset are mapped, gene annotations,...3601 days ago
Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human populations All genomes in the dataset were sequenced to at least 30x coverage using Illumina technology. The seque...1108 days ago
2822 days ago
2730 days ago
2721 days ago
2594 days ago
Omega2: metagenome assembly pipeline
...n graph assemblers (SOAPdenovo, IDBA-UD and MetaVelvet), Omega provided comparable overall performance on a HiSeq 100-bp dataset and superior performance on a MiSeq 300-bp dataset. In comparison with Celera on...2507 days ago
Meraculous: De Novo Genome Assembly with Short Paired-End Reads
...hort reads, and apply it to the assembly of a dataset of paired 75-bp Illumina read...es with unique high quality extensions in the dataset, avoiding an explicit error c...red-end placements. Practical issues with the dataset are described, and prospects...2387 days ago
ONT assembly and Illumina polishing pipeline
...u contigs using racon (optional). Map a paired-end Illumina dataset onto the contigs obtained in...Perform correction of contigs using pilon and the Illumina dataset....2371 days ago