Results for "detect"
Top-level pages
...nctional annotation in the comparison of whole genomes. Several methods detect glycolysation, myristylation...ion of gene order or operon organisation in different genomes. Also the detection of gene fusion and gene fi...3946 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...es a reference sequence] Quake: quality-aware detection and correction of sequenci...and Beyond: new and improved methodologies to detect and characterize protein-DNA...ge] Comparing genomes and assemblies; variant detection Versatile and open softw...3778 days ago
List of In-silico Binding Site Prediction Tools
...e local structural similarity for detecting the unbound split characte...g sites sharing atomic similarity detected by geometric hashing (Brako....si/index.php algorithm for detection of structurally similar pr...source platform for ligand pocket detection", BMC Bioinformatics, 2009...3742 days ago
Commercial and public next-gen-seq (NGS) software
...before assembly. Includes SNP detection, CHiP-seq, browser and oth...supporting tools for DIP/SNP detection, etc. C++ source MOSAIK -...- ssahaSNP is a polymorphism detection tool. It detects homozygou...unspliced alignments and SNP detection of short sequence reads. F...3517 days ago
Software packages for next gen sequence analysis
...before assembly. Includes SNP detection, CHiP-seq, browser and oth...supporting tools for DIP/SNP detection, etc. C++ source * MOSAIK...- ssahaSNP is a polymorphism detection tool. It detects homozygou...unspliced alignments and SNP detection of short sequence reads. F...3241 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...S, Pathway enrichment, Fusion detection and Variant calling Allow...SOAPindel Description: detects indels from NGS paired-end s...iption: command-line program, detection of rare SNVs, relies upon...ystems; can compare mutations detected in dpSNP or 1000 Genomes Pr...2907 days ago
Genome Assembly Tools and Software - PART1 !!
...le format conversion and mutation detection. COCACOLA – Bin...Specifically it facilitates rapid detection of inconsistencies between...de novo gene sequencing, mutation detection, forensic human identifica...Quel v1.0beta – Misassembly Detection in Draft Genomes misSEQ...2684 days ago
Awesome perl frameworks, libraries and software - PART 1
...- OAuth 2.0 for Perl wireghoul/doona - Fork of Bruteforce Exploit Detector pjf/autodie - Make fu...configuration and representing it as objects in perl. cyberisltd/ProxyDetect - Perl script to detect...2488 days ago
- ...q data --plasmid runs plasmidSPAdes pipeline for plasmid detection --iontorrent t...input reads (33 or 64) [default: auto-detect] As you can see this is...
2349 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
...become “domesticated” in the recipient genome and provide novel function. Following are the popular tool to detect HGT in genomes: T-REX / 3.22 HGT detection / download & comp...849 days ago
