2865 days ago
List of tools frequently used while genome assembly
List of tools frequently used while genome assembly: I have used the following assemblers Spades (v. 3.10.1) CANU (v. 1.6) Unicycler (v. v0.4.1) Miniasm&nb...1945 days ago
Ensembl comparative genomics resources
...used to define Ensembl Protein Families, GeneTrees and homologies for both protein-coding and non-coding RNA genes. These resources are updated frequently and have a consistent informa...3003 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to the frequently used tools for NGS analysis as well as giving experience in writing one-liners. Copy the required files to your c...2889 days ago
Awesome perl frameworks, libraries and software - PART 4
...ge, with explicit plans to support btrfs when btrfs becomes more reliable. Primarily intended for Linux, but BSD use is supported and reasonably frequently tested. duritong/puppet-nagi...2509 days ago
3961 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
...er bond.CpG islands are often located around the promoters of housekeeping genes (which are essential for general cell functions) or other genes frequently expressed in a cell. At these...3839 days ago
3468 days ago
Memories Can Be Passed Down Through DNA
.../abs/nn.3594.html "Using olfactory molecular specificity, we examined the inheritance of parental traumatic exposure, a phenomenon that has been frequently observed, but not understood....3662 days ago
Steps to install Conda on Linux !
...$ ./Anaconda3-2020.11-Linux-x86_64.sh #Follow the yes/no flags and finish till the end #Check the installation $ conda -V A few other frequently used commands # list all the...1197 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3541 days ago
List of tools frequently used while genome assembly
List of tools frequently used while genome assembly: I have used the following assemblers Spades (v. 3.10.1) CANU (v. 1.6) Unicycler (v. v0.4.1) Miniasm (v. 0.2-r137-dirty) I have used the following mappers minimap2 (v. 2.0rc1-r232) minimap (v. 0.2...Tags: List, tools, frequently, genome, assembly
1945 days ago