Results for "homologous"
Blogs
Tools to detect synteny blocks regions among multiple genomes
...here have been various algorithms developed to identify the conserved homologous synteny blocks (HSB) amongst...species. It is intended to help scientists study and analyze synteny, homologous genes and other conserved ele...2623 days ago
Structural variation: the hidden genomic treasure
...nerated by several different mechanisms including non‐allelic homologous recombination, non‐homologous end‐joining and deoxyribonucl...ariants can arise by several mechanisms, including nonallelic homologous recombination (NAHR), nonhomo...2715 days ago
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Bookmarks
PhyloGrapher - Graph Visualization Tool
PhyloGrapher is a program designed to visualize and study evolutionary relationships within families of homologous genes or proteins (elements).PhyloGrapher is a drawing tool...2963 days ago
Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny blocks (HSBs). Using porcine HSBs and stringent filtering...2746 days ago
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Top-level pages
- ...edict function. The function can often be inferred if a sequence of a homologous protein with known function c...70 %. 3D models can be obtained most easily if the 3D structure of a homologous protein is known (homology mo...
3960 days ago
List of In-silico Binding Site Prediction Tools
...e. If a sequence is submitted then Phyre is run to predict the structure. The structure is then ussed to search a structural library to identify homologous structures with bound ligands...3757 days ago
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Wire posts
News
Breaking chromosomes to study cancer !!!
...osomal translocations occur following double-strand breaks (DSBs) in DNA when a section of one chromosome is exchanged with that of another, non-homologous chromosome. These exchanges m...3592 days ago
Illumina to Acquire Pacific Biosciences for Approximately $1.2 Billion !
...ng platforms address the majority of sequencing applications optimally, select applications, such as de novo sequencing and sequencing of highly homologous regions of genomes, are bette...2024 days ago
Video
Bioinformatics -- Understanding of living systems through information science
...ngements, such as inversions, transpositions, and duplications, occur. The genome comparison system developed by the Sakakibara Lab calculates homologous sequences called anchors, whi...3930 days ago
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Comment on "Tools to detect synteny blocks regions among multiple genomes"
...gous genes: Identify the orthologous genes between the genomes using tools such as OrthoFinder or OrthoMCL. Orthologous genes are genes that are homologous and have a common ancestor, b...436 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Thanks for such an informative blog. I notice MCScan is missing. MCScan is an algorithm able to scan multiple genomes or subgenomes in order to identify putative homologous chromosomal regions, and align these regions using genes as anchors. More at http://www.ncbi.nlm.nih.gov/pubmed/222176003686 days ago
