Results for "human reference genome"
Blogs
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amo...type of analysis that you are doing. This is particularly true in the case of genome assembly and annotation. At...3700 days ago
- In comparative genome analysis work, we usually compare more than two genomes and looks for syntenic regions amongst them. In my research...igned to provide a visual means for simultaneously comparing genomes of multiple amniote species....
3932 days ago
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Bookmarks
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3938 days ago
- Bioinformatics is developing very rapidly. With new tools an...g fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein s...ession, constructing evolutionary trees, analyzing genome rearrangements, and identifyi...
3937 days ago
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Files
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve...write our own cheat sheet. The Regular Expressions Cheat Sheet, a quick refere...3945 days ago
- In an attempt to find a good Linux reference for bioinformatician and BOL readers, I was unsuccessful at finding a decent one on the Internet. So, we decided to make a cheat sheet for biological programmers.
3945 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had a l...3944 days ago
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3937 days ago
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Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for easy implementation, it com...ex.htmlDownload Linkshttp://162.38.181.25/BioPP/articles/download/index.html Refere...3940 days ago
- Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balanced...al implementation is considered to be the de facto reference. As of 2010, there are a numb...ntually supersede the slower Ruby MRI. Ruby Quick Refere...
3940 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA seq...on sequencing” (HT-NGS). The decreasing genome sequencing cost and desire to...ally suitable language to handle ever growing genome or protein sequences. The ne...
3940 days ago
- ...nsive electronic databases on genomes and protein sequences, and tech...s on three types of datasets: genome sequences, macromolecular struct...mpare it with a collection of reference profiles and other related...equencing and analysis of the human genome. Nature 409:860–9...
3940 days ago
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Wire posts
News
- The ongoing genomic research in USA contributed $31 billion to the U.S. gross national product and helped support 152,000 jobs. Reference: http://www.unitedformedicalresearch.com/wp-content/uploads/2013/06/The-Impact-of-Genomics-on-the-US-Economy.pdf
3945 days ago
- "Ludovic Orlando and Eske Willerslev , Centre for GeoGenetics ...y.htm http://geogenetics.ku.dk/latest-news/a-700.000-year-old-horse-gets-its-genome-sequenced/
3804 days ago
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Opportunity posts
Livestock Functional Genomics Summer School (LFG 2013)
*Livestock Functional Genomics Summer School - Call for applications* 1st Livestock...k big molecular data, and be able to manipulate high density genotypes, whole genome sequences and transcriptome d...3921 days ago
2013 NextGen Genomics & Bioinformatics Technologies (NGBT) Conference, New Delhi, INDIA
...& Healthcare conference. In the ten years since the first human reference genome was completed for US$3 billion t...y changed leading to great reduction in sequencing cost. Today a human genome can be sequenced for under US...3915 days ago
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ResearchLabs posts
- The human genome project and similar projects in disease-causing organisms...ium falciparum, which causes malaria in humans, h...ted the development of understanding in human disease....lysis of structural variation in cancer genomes Next Generation sequencing...
3940 days ago
- Statistical functional genomics in experimental medicine The genome projects and the accelerated development of high-throughput genomic technologies such as microarrays have revolutionised biology....
3940 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movie...BLAST : Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST kiya. NCBI...rmatician No.1 Mera Naam Tool Developer Hum Apke Genome Mein Rehte Hein Do Seq...3911 days ago
What a bioinformatician always dream for ???
Well established bioinformatics labs with SGI(silicon graphics interface) License of all commercial softwares. Complete, and fully assembled genome of the girl :P A girl/boy wi...3837 days ago
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Video
- View more AMAZING medical animations at http://www.nucleuslibrary.com To do.../yt2012 This 3D medical animation shows human fertilization, also known as...odds to unite with an egg and form a new human lif...nd a single sperm combines to form a new human...
3810 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA...ation, and this is called the genome. But the amount of informatio...various organisms - not just humans, but monkeys, chimpanzees, ba...as decoded the natto bacillus genome, through analysis using Keio'...3909 days ago
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Bio-Scripts
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has more (1200?), but they require you to sign up import...1128 days ago
Download genome using NCBI esearch command line !
#Download using command line "NC_005956.1" / "CP003784.1" esearch -db nucleotide -query "NC_005956.1" | efetch -format fasta > seq1.fa esearch -db nucleotide -quer...1094 days ago
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Polls
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand. An explosion in biological data has resulted from genome projects, next generation seq...3409 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering...g for (AKMARK (Project CODE:5153403)) is, applying a bioinformatics-supported genome, transcriptome, proteome, and...2354 days ago
Groups
INTIMATE secrets hidden in your DNA could be stolen...ing a glass from which you have drunk, a "genome hacker" could obtain a comprehensive scan of your genome, revealing DNA variants that...t or bioinformatician you hack the entire genome to understand the god's writt...3945 days ago
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provides...cuss the features, uses, and application of BioJava in biological researchs. Refere...3895 days ago
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Tags
Resolving the complexity of the human genome using single-molecule sequencing
The human genome is arguably the most complete mammalian reference assembly yet more than 160 euchromatic gaps remain and aspects of its structural variation remain poorly understood ten years after its completion. The results in this paper https://www.genomeweb.com/sequencing/team-uses-single-mo...Tags: variants, human reference genome, structural and sequence variation, genome assembly
3213 days ago
Comments
Comment on "Next generation sequencing in R or bioconductor environment"
...mmon question like ... where to find human reference genome? What is reference annotation, how to download i...ful:ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/technical/reference/ftp://ftp.ncbi.nlm.nih.gov...ucsc.edu/goldenPath/hg19/chromosomes/Reference annotation downloadhttp://...3613 days ago
Comment on "Does anyone have Nanopore latest updates?"
...ht research teams -- are the latest awarded through the National Human Genome Research Institute (NHGRI)'s Adv...NA Sequencing Technology program and director of the Division of Genome Sciences. Reference http://www.eurekalert.org/...3878 days ago
