List of gene ontology software and tools
...to people working in a wet-lab. CLASSIFI (Department of Pathology, UT Southwestern Medical Center) CLASSIFI (Cluster Assignment for Biological Inference) is a data-mining tool that c...3724 days ago
Computer simulation of genetic mechanism !!
...ider. http://www.stanford.edu/group/hadlylab/ssc/index.html BaySICS An integral platform with a graphical interface for statistical inference based on approximate Bayesian...2990 days ago
Next Generation Sequencing (NGS) Tutorials
...of genome sequencing: Tutorial by Luke Jostins. http://www.genetic-inference.co.uk/blog/2009/04/basics-sequencing-dna-part-1/ http://www.genetic-inference.co.uk/blog/2009/08/basics-seq...3502 days ago
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Genome Assembly Tools and Software - PART2 !!
...errors and transferring annotation. ShoRAH 0.8.2 – Short Reads Assembly into HaplotypesShoRAH is a software package that allows for inference about the structure of a popu...2700 days ago
Awesome perl frameworks, libraries and software - PART 3
...adFirstMoose - 使用Perl + Moose实现《Head First Design Pattern》的大部分例子 mudler/GitInsight - Predict your github contributions using Bayesian inference and Markov chain with perl an...2509 days ago
Phylogenetic for Bioinformatics
...df Phylogenetic Tree Computation Tutorial Overviewhttp://pga.lbl.gov/Workshop/April2002/lectures/Olken.pdf MrBayes: A program for the Bayesian inference of phylogenyhttp://golab.unl....3961 days ago
List of bioinformatics open source projects/software.
...ormatics toolkit built using the Microsoft 4.0 .NET Framework to help developers, researchers, and scientists. AMPHORA ("AutoMated Phylogenomic infeRence Application") http://wolbach...3771 days ago
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IQ-TREE: Efficient software for phylogenomic inference
A fast and effective stochastic algorithm to infer phylogenetic trees by maximum likelihood. IQ-TREE compares favorably to RAxML and PhyML in terms of likelihoods with similar computing time IQ-TREE found higher likelihoods between 62.2% and 87.1% of the studied alignments, thus effici...Tags: IQ-TREE, Efficient, software, phylogenomic, inference
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HipSTR: Haplotype inference and phasing for Short Tandem Repeats
HipSTR was specifically developed to deal with these errors in the hopes of obtaining more robust STR genotypes. In particular, it accomplishes this by: Learning locus-specific PCR stutter models using an EM algorithm Mining candidate STR alleles from population-scale sequencing dat...Tags: HipSTR, Haplotype, inference, phasing, Short, Tandem, Repeats
1900 days ago
Comment on "R and Bioconductor Tutorial"
...acamp.com/courses/introduction-to-r> Data analysis and statistical inference course by a professor from Du...ersity https://www.datacamp.com/courses/data-analysis-and-statistical-inference_mine-cetinkaya-rundel-by-data...3568 days ago