Results for "insert"
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BBTools for bioinformatician !
...multiple threads, because the insert-size average is calculated on...sequence of reads with short insert sizes, in case you don't know...can specify paired reads, an insert size distribution, read lengt...can specify paired reads, an insert size distribution, read lengt...2298 days ago
Insert data through ajax into MySql database.
Insert data through ajax into MySql database.1. Create for...+'&email1='+ email; $.ajax({ type:"POST", url:"insert.php", data:sdatatring, cache:...mit" value="submit" /> </form> 2. Create insert.php and copy below code into...2228 days ago
Bookmarks
REAPR: a universal tool for genome assembly evaluation
...ly in a BAM file. Mapping information such as the fragment coverage and insert size distribution is analysed...e mis-assemblies. REAPR works best using mapped read pairs from a large insert library (at least 1000bp). Ad...2978 days ago
- ...s comprehensive, and integrates read quality, mate pair orientation and insert length (for paired-end reads)...n both single and metagenomic assemblies, including single-base errors, insertions/deletions, genome rearran...
2958 days ago
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Genome Assembly Tools and Software - PART2 !!
...ly tools, and modular in nature so that new contributions can be easily inserted into an existing assembly p...g the string graph. MindTheGap 1.0.0 – Detection and Assembly of Insertion VariantsMindTheGap is...2713 days ago
Top-level pages
Genome Assembly Tools and Software - PART1 !!
...e assembly in a model encompaasing error rate, insert length and other features of...ut also retains long deletions, novel sequence insertions, translocations and copy...illumina sequenced Pair-End reads of which the insert size is smaller than the sum...2713 days ago
Awesome perl frameworks, libraries and software - PART 1
...f Underscore.js techsneeze/dmarcts-report-parser - A Perl based tool to parse DMARC reports from an IMAP mailbox or from the filesystem, and insert the information into a databa...2516 days ago
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Beginners MYSQL Database Tutorial 1 # Download , Install MYSQL and first SQL query
...hes related to install mysql and write query install mysql query browser mysql write query to file how to write delete query in mysql how to write insert query in mysql how to write u...3675 days ago
Bio-Scripts
Perl script to insert sequence in contig !!
# sub signature: #insertSEQintoCONTIGatLOC( SEQ , CONTIG , LOC ) ; sub insertSEQintoCONTIGatLOC{ my ( $SEQ , $CON...ATAGATAG"; print "s = $s \n"; print 'insert = '.($s = insertSEQintoCO...GATAGATGATAGTAGATAGATAGATAGATAGATAG # insert = 'CCCC ' # (now, s...2735 days ago
Perl script to insert the DNA string in genome
...q; my $file = $ARGV[0]; # input fasta file (genome file) my $out = $ARGV[1]; # output fasta file my $chr="test"; #insertion chromosome my $pos=10; # position of the insertion my $seqI = "AAAA"; #seque...2686 days ago
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- ...s users to simulate reads with different error rates, read lengths, and insert sizes. The ART is open-source...different sequencing parameters, such as error rates, read lengths, and insert sizes. SimSeq: SimSeq is...
443 days ago
- ...e "***** NOTE ***** Paired-end (Mate-pair) input" below OTHER OPTIONS -n{INT} INT: Lib_id Minimum_insert_size Platanus automatically estimates insert size of each library....
2826 days ago
