3371 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid...nce. For proteins, a sequence motif is distinguished from a structural motif, a motif formed by the three-...(and DNA) domains, patterns, motifs, protein families, and funct...pattern database for protein motifs. PRIDB -- Protein-RNA I...1994 days ago
List of comparative genomics resources !
...- Regulon Prediction Database Find information about predicted regulons in prokaryotic transcription regulation. SALAD -- Surveyed contained motif ALignment diagram and the Ass...678 days ago
Public Databases for Bioinformatics !
...u must chown /mnt/lab_data/$LAB/ lab accessible data should store lab project data here e.g. ATAC-seq prediction data, enhancer prediction, motif calls /srv/scratch/$USER...1140 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...analysis and comparative genomics. Sequence analysis: Multiple sequence alignment, sequence search and clustering, function prediction, motif discovery, functional site re...3499 days ago
Next generation sequencing in R or bioconductor environment
...space), strand information and annotation data. Documentation Motif Discovery cosmo The cosmo package allows to search a set of unaligned DNA sequences for a shared motif that may function as transcri...3625 days ago
MOTIF 2015 – NATIONAL SEMINAR ON BIOINFORMATICS & BIOPHARMACEUTICALS -NSBB’15
What is Motif’15? The program “MOTIF” is an annual event condu...form. How to register for Motif’15? Registration for P...titions is open now. The ‘Motif’15’ brochure and...mbatore and send to ‘MOTIF,Co-ordinator, Dr. M Jeyam, Bi...3373 days ago
MOTIF 2015 – NATIONAL SEMINAR ON BIOINFORMATICS & BIOPHARMACEUTICALS -NSBB’15
What is Motif’15? The program “MOTIF” is an annual event conducted by...tion form. How to register for Motif’15? Registration for Parti...on/Competitions is open now. The ‘Motif’15’ brochure and registration...ayable at Coimbatore and send to ‘MOTIF,Co-ordinator, Dr. M Jeyam, Bi...3372 days ago
3166 days ago
3228 days ago
Bioinformatician become producer/director !!!
...u ban gaya Genefinder. Har Ligand jo dock karega. Alignment to hona hi tha. Mera sequence mera base. Markov aapke hai kaun. Algo Banya Apne. MOTIF mil gaya. BLASTana FASTAna....3919 days ago
3944 days ago
Tags: Protein, Motif, evolution, Blast, HMM, Dr. R.Sowdhamini, India
3885 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
This tutorial covers topics independently of HOMER, and represents knowledge which is important to know before diving head first into more advanced analysis tools such as HOMER. Setting up your computing environment Retrieving and storing sequencing files (your own data or from public so...Tags: Bioinformatics, NGS, Motif, Tutorial
2932 days ago
Comment on "List of motif discovery tools !"
Bioinformatics for Beginners https://www.coursera.org/learn/bioinformatics which can help with learning the basics of the algorithms underpinning motif discovery.1982 days ago
Comment on "List of motif discovery tools !"
Motif algorithms This link on Nature explain: how does DNA sequence motif discovery work? Paper on BMC bioinformatics: survey of DNA motif finding algorithms This paper discusses some limitations and potentials of motif discovery algorithms (2005)1982 days ago