List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biological phrases to specific ge...tterplots, interactive graphs, or tag clouds. http://revigo.irb.hr/ QuickGo (EMBL-EBI Institute) It uses exten...3767 days ago
Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial amounts of genetic variation b... R Package https://www.bioconductor.org/help/course-materials/2010/EMBL2010/Practical-4-StructuralVar...2760 days ago
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Bio++ : C Language libraries for your biological need
...herwise require the use of Assembly Language. As Dennis Ritchie wr...ficient enough to displace assembly language, yet sufficiently abst...o fetch public databases like GenBank, EMBL or SwissProt,Algorithms for p...Mase, CLustal, Phylip, DCSE, GenBank (sequence only).Sequence m...4005 days ago
Introduction to Bioinformatics
Bioinformatics (Genomics) Biocomputing in a Nutshell. Biologist's Guide to Internet Resources Computational Molecular Biology Course Course on Bioinformatics EM...3978 days ago
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Chromatin: From nucleosomes to chromosomes, 30 April - 2 May 2014
EMBL-EBI announced the Wellcome Trust Scientific Conference Chromatin: From nucleosomes to chromosomes, which continues EMBL-EBI series of meetings focuse...3982 days ago
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EMBL Postdoc position in Bacterial Gene Gain Loss
A post-doctoral fellowship is available in the research gro...enetics Department, Cambridge University) under the EMBL-EBI / Cambridge Computational...h/postdocs/ebpods/projects/goldman-welch-2015 . The EMBL-EBI / Cambridge Computational...3238 days ago
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Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Munn...Sequence Baarah Hit Tera Ligand Chal Gaya Har Din Jo Modeling Karega Genb...3975 days ago
Critical to discoveries in bioinformatics
EMBL-EBI distributes datasets worldwide using the Janet network. This biological data enables the discovery of new drugs, new diagnostics and increasingly new agro-che...3849 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisai...yaml.load(requests.get("https://www.ncbi.nlm.nih.gov/core/assets/genbank/files/ncov-sequences.yaml").text) seqs = seqs['genb...1193 days ago
BioPerl to convert between sequence formats from Fasta to Genbank
#!/usr/local/bin/perl -w # Sequence formats to choose: Fasta, EMBL. GenBank, Swissprot, PIR and GCG us...'Fasta'); $out = Bio::SeqIO->newFh('-format' => 'Genbank'); print $out $_ while ;...2973 days ago
How to retrieve data from public databases like OMIM, genbank and embl ?
i am to build a datawarehouse for cancer genes and i need to get the data from public databases. How to do that ?Tags: omim genbank embl
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