RestrictionDigest: A powerful Perl module for simulating genomic restriction digests
RestrictionDigest can simulate the reference genome digestion and generate comprehensive infor...e across the genomes. For more information, please see the academic paper published onlin...2154 days ago
AlignQC: A tool for assessing an alignment, and generating reports that are easy to share
Long read alignment analysis. Generate a reports on sequence alignments for mappabilit...ires a BAM file, and outputs a web browser compatible xhtml to visualize/share/store/extract analysis results. ht...2098 days ago
VariantBam: Filtering and profiling of next-generational sequencing data using region-specific rules
VariantBam is a tool to extract/count specific sets of sequ...save money, disk space and I/O, one may not want to store an entire BAM on disk. In many cases, it would be more efficient to store only those read-pairs or read...2040 days ago
VGSC: A Web-Based Vector Graph Toolkit of Genome Synteny and Collinearity
VGSC, the Vector Graph toolkit of genome Synteny and Collinearity, and its online service, to visualize the synteny and collinearity in the common graphical format, including both raster (JPEG, Bitmap, and PNG) and vector graphic (SVG, EPS, and PDF).2014 days ago
1973 days ago
Genome Annotation using MAKER tutorial !
MAKER is a great tool for annotating a reference genome using empirical and ab initi...ons. GMOD, the umbrella organization that includes MAKER, has some nice tutorials onlin...1962 days ago
gVolante: Completeness Assessment of Genome/Transcriptome Sequences
A brand-new web server, gVolante, which provides an online tool for (i) on-demand completeness assessment of sequence sets by means of the previously developed pipelines CEGMA and BUSCO and (ii) browsing pre-computed completeness scores for publicly available data in its database section1939 days ago
1937 days ago
gVolante: Completeness Assessment of Genome/Transcriptome Sequences
gVolante provides an online interface for completeness assessment of user’s original or publicly available sequence datasets as well as for browsing results of completeness assessment performed on publicly available genome and transcriptome assemblies.1733 days ago
WOS-C Women Scientist Scheme KIRAN-IPR
Women Scientist Scheme WOS-C is one among the most coveted programs that Women Scientists in...n process for the WOS-C Women Scientist Scheme is via an online...shortlisted applicants will be called to appear for the onlin...1590 days ago