Ensembl comparative genomics resources
...both protein-coding and non-coding RNA genes. These resources are updated frequently and have a consistent informatics infrastructure and data presentation across all supported species....2996 days ago
2747 days ago
Genome assembly stats plotting
...length/count distribution assembly-stats supports two widely used presentations of these values, tabular and...monly used assembly metrics in a single visualisation. Each of these presentations is generated using javascrip...2266 days ago
Bokeh: An interactive visualization library that targets modern web browsers for presentation
Bokeh is an interactive visualization library that targets modern web browsers for presentation. Its goal is to provide elegant, concise construction of versatile graphics, and to extend...2102 days ago
1791 days ago
Miropeats: discovers regions of sequence similarity amongst any set of DNA sequences
...ry general tool that forms the basis of many different biological sequence analyses but it is limited by the verbosity of traditional alignment presentation styles. Miropeats enhances th...1721 days ago
jtools : more efficient presentation of regression analyses
...unctions created by the author (Jacob) to automate otherwise tedious research tasks. At this juncture, the unifying theme is the more efficient presentation of regression analyses. There...1552 days ago
truvari: Structural variant comparison tool for VCFs
Structural variant comparison tool for VCFs Given benchmark and comparsion sets of SVs, calculate the recall, precision, and f-measure. Spiral Genetics Motivation1412 days ago
SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis
...14].SHAMAN is compatible with standard formats for metagenomic analysis (.csv, .tsv, .biom) and figures can be downloaded in several formats. A presentation about SHAMAN is available&nbs...1365 days ago
oGNM:Conformational dynamics based on contact topology in a coarse-grained presentation
Gaussian Network Model (GNM) is a powerful tool to sample conformational dynamics based on contact topology in a coarse-grained presentation. Here we present a method to consider protein...847 days ago