Results for "project"
Bio-Scripts
R script to visualize fastANI core-genome comparison
...# Purpose: Visualize fastANI core-genome comparison # Usage: Rscript # Output: .pdf # Uses genoPlotR package: http://genoplotr.r-forge.r-project.org #Parse command line ar...1114 days ago
#Install older version of R Packages !
#Install older version of R Packages ! require(devtools) install_version("IdeoViz", version = "0.9.1", repos = "http://cran.us.r-project.org")2073 days ago
Bash commandline to install Anaconda !
...ling: sphinx-1.8.5-py37_0 ... installing: spyder-kernels-0.4.2-py37_0 ... installing: anaconda-navigator-1.9.7-py37_0 ... installing: anaconda-project-0.8.2-py37_0 ... installing:...1568 days ago
Installing ggplot2 and its dependencies on Ubuntu !
...trying URL 'https://cloud.r-project.org/src/contrib/ellipsis_0.3....trying URL 'https://cloud.r-project.org/src/contrib/stringi_1.4.5...trying URL 'https://cloud.r-project.org/src/contrib/labeling_0.3....trying URL 'https://cloud.r-project.org/src/contrib/ggplot2_3.2.1...1563 days ago
To convert just one specific read group to fastq
# Stop script on error. set -uex # The SRR BioProject number for the sequencing data. PROJECT=PRJNA257197 # The number of datasets to subselect from the project. N=5 # Get the project ru...1555 days ago
- library(vcfR) vcf_file
1538 days ago
Commands to install conda in Ubuntu !
...istribution that relate to cryptogr aphy: openssl The OpenSSL Project is a collaborative effort to...installing: anaconda-navigator-1.9.7-py37_0 ... installing: anaconda-project-0.8.2-py37_0 ... installing:...1524 days ago
- (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 ---...
1455 days ago
Install and set up i-adhore for synteny and wgd analysis ! -- step by step --
...VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility w...%] Built target i-visualize [100%] Built target i-adhore Install the project... -- Install configuration:...1217 days ago
- ...n. ## download and extract cd ~/workspace/bin wget https://cran.r-project.org/src/base/R-3/R-3.5.1.tar...., "BiocManager", "dplyr", "tidyr", "ggplot2"), repos="http://cran.us.r-project.org")'
836 days ago
