3919 days ago
2069 days ago
FRODOCK 2.0: fast protein–protein docking server
...interactively screen them against experimental distance constraints. The competitive success rates and efficiency achieved allow the retrieval of reliable potential protein–prote...2049 days ago
LTR_Finder: an efficient program for finding full-length LTR retrotranspsons in genome sequences.
...air candidates to get alignment boundaries. These boundaries are subject to re-adjustment using supporting information of TG..CA box and TSRs and reliable LTRs are selected. Next, LTR_...1961 days ago
gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output
gapFinisher is based on the controlled use of a previously published gap filling tool FGAP and works on all standard Linux/UNIX command lines. They compare the performan...1585 days ago
1550 days ago
Dahak: benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.
...ssembly, taxonomic and functional classification, genome binning, and gene assignment. We aim to deliver the analytical framework as a robust and reliable containerized workflow system...1509 days ago
gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output
gapFinisher to process SSPACE-LongRead output to fill gaps after the scaffolding. gapFinisher is based on the controlled use of a previously published gap filling tool FGAP and works on all standard Linux/UNIX command lines. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6733440/1474 days ago
Genomic Open-source Breeding informatics initiative
...with precision breeding tools to advance yields and adaptation to local growing conditions, bringing global communities closer to a sustainable, reliable food supply....1237 days ago