funannotate: Eukaryotic Genome Annotation Pipeline
...or this software package was to be able to accurately and easily annotate a genome for submission to NCBI GenBank. Existing tools (such as Maker) require significant manually editing...2069 days ago
2017 days ago
dnaPipeTE: a pipeline designed to find, annotate and quantify Transposable Elements
...sable Elements in small samples of NGS datasets. It is very useful to quantify the proportion of TEs in newly sequenced genomes since it does not require genome assembly and works on...1741 days ago
Liftoff: an accurate tool that maps annotations in GFF or GTF between assemblies
...l that maps annotations in GFF or GTF between assemblies of the same, or closely-related species. Unlike current coordinate lift-over tools which require a pre-generated “chain&...1418 days ago
Liftoff: An accurate GFF3/GTF lift over pipeline
...rately maps annotations in GFF or GTF between assemblies of the same, or closely-related species. Unlike current coordinate lift-over tools which require a pre-generated “chain&...1246 days ago
Fix rewritable error of ELGG !
...;VirtualHost *:80> <Directory /var/www/html> Options Indexes FollowSymLinks MultiViews AllowOverride All Require all granted </Directo...916 days ago
odgi: optimized dynamic genome/graph implementation
...he cost of packing and unpacking. The RAM and computational savings are substantial. In partially ordered regions of the graph, most deltas will require only a single byte.837 days ago
407 days ago