Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on..., SyMAP (http://www.symapdb.org/) SyMAP (Synteny Mapping and Analysis Program) v4.0 is...itable image of syntenic relationships or physical mapping can be obtained. http://www.a...2632 days ago
List of bioinformatics packages for NGS analysis !
Package suites gather software packages and installation tools for specific languages or platforms. We have some for bioinformatics software. Bioconductor &ndas...1164 days ago
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec) and k-ne...1168 days ago
Comparison of Short Read De Novo Alignment Algorithms
Excellent article to introduce different sequencing methods along with tools for de novo assembly of sequencing reads and their relevant references. Title: Comparison of Short Read De Novo Alignment Algorithms Author: Nikhil Gopal3932 days ago
Bioinformatics approach to Boar Taint
...were done in Illumina HiSeq2000 to >10X average coverage. Short reads generated from these samples...aplotypes in close linkage disequilibrium with QTLs and fine mapping of QTLs through association mapping of genotyped SNPs. &nb...3811 days ago
1636 days ago
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allow....Ancestral states reconstructions: Marginal likelihood.(Weighted) substitution mapping.Sequences simulation under an...3969 days ago
Monitor running jobs on Linux server
You as a bioinformatican run lots of program on your servers. Sometime the shared server is...current time, how long the machine has been up, how many users are logged in, and the short/m...3642 days ago
3964 days ago
Bioinformatics Courses Around the World
Bioinformatics Courses around the world Here is the list Bioinformatics courses offere...metryhttp://www.cs.helsinki.fi/combi/ Human Genome Mappi...Part-time Modular MSc in Bioinformatics and regular short professional updating courses,...3965 days ago
3891 days ago
Illumina reveals first dataset of long reads
With the help of Moleculo technology , acquired by Illumina releases new service for long reads sequencing i.e., FastTrack Long Reads. Average read length is around 8,500 base pair...also check following pages for publications on long reads a...3930 days ago
Ph.D. Fellowship (Computational Biology/Bioinformatics) : Cork, Ireland : Cork, Ireland
Ph.D. Fellowship (18,000 euro/pa, plus tuition fees at the EU students rate) is avai...some profiling data. Ribosome profiling (ribo-seq) is a technology that allows mapping positions of the ribosomes on...3937 days ago
CSIR-INSTITUTE OF GENOMICS & INTEGRATIVE BIOLOGY
CSIR-INSTITUTE OF GENOMICS & INTEGRATIVE BIOLOGY, Mall Road, Delhi 110007 POSITIONS O...atus or after due date. The email will be sent to the short...will have an option to give reply in Hindi. Note: The shortli...3924 days ago
3969 days ago
3835 days ago
Introduction to programming. Write short programs that generate graphics and animation.
Introduction to programming. Write short programs that generate graphics and animation. http://funprogramming.org/3573 days ago
3936 days ago
A Brief Introduction to Genetics
A Brief Introduction to Genetics is a short documentary film that explores the history of genetics & genomics and the underlying concepts that provide the foundational know...3925 days ago
2893 days ago
Create genome scaffolding with Perl
#!/usr/bin/perl use warnings; use strict; use English; use Pod::Usage; ## uses pod d...e} && $targetSeqs{$tName}){ my %meta = (); my $short...= ($tSize < $qSize) ? 1 : 0; my $longTarget = (1 - $shortTa...2330 days ago
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is...informatics tools or software. I basically want to do de-novo assembly, map reads, align reads,...3552 days ago
Bioinformatics Skill Development Program (BSDP)
Hey! Welcome to Bioinformatics Skill Development Program (BSDP) series group....The Bioinfor...matics education portal, began offering one and two week short...advanced technologies.For two years, the series offered short c...3729 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...s: -t --thread [INT] Number of threads. [1] -l --seed-len [INT] Leng...GEM-mapper's fastest mode(--fast-mapping=0). [false] Scoring option...mum error rate of mismatch within reads. [0.04] -T --read-type [STR]...). [stdout] -h --help Print this short usage. -H --HELP Print a detail...2144 days ago
2820 days ago