Tools to detect synteny blocks regions among multiple genomes
...syntenic relationships or physical mapping can be obtained. http://www.automatizacionysistemas.com/Poster_MapSynteny.pdf One of the best synteny tutorial for beginer @ http://www...2602 days ago
Basic command-line to run BLAST
The goal of this tutorial is to run you through a demonstration of the command line, which you may not have seen or used much before. All of the commands below can copy/pas...2237 days ago
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Bio++ : C Language libraries for your biological need
...d lineetc. Some of the libraries are under development that will be updated by Bio++ developers on there websites.C/C++ Tutorialhttp://www.cbcb.umd.edu/~jeallen/bioinfo/Tutorial on Bio++http://162.38.181.25/...3940 days ago
BioRuby :Ruby packages for biologist
...ioruby.org/en/ BioRuby in Angerhttp://dev.bioruby.org/en/?BioRuby+in+Anger BioRuby RDocshttp://bioruby.org/rdoc/ BioRuby Tutorial Websitehttp://dev.bioruby.org/en/?Tutorial.rd Why BioRuby Hub for BioRu...3940 days ago
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Estimate Genome Size with Jellyfish and R
jellyfish count -t 8 -C -m 19 -s 5G -o 19mer_out --min-qual-char=? /common/Tutorial/Genome_estimation/sample_read_1.fastq /common/Tutorial/Genome_estimation/sample_read_2.fastq #-t -treads=unit32 Num...2238 days ago
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A guide for complete R beginners :- R Syntax
R is a functional based language, the inputs to a function, including options, are in brackets. Note that all dat and options are separated by a comma Function(data, options) Even quit is a function q() So is help help(read.table) Provides the help page for the FUNCTION ‘r...Tags: Bioinformatics, Computational Biology, Education, Tutorial, R, Basics, Syntax
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A guide for complete R beginners :- Getting data into R
For a beginner this can be is the hardest part, it is also the most important to get right. It is possible to create a vector by typing data directly into R using the combine function ‘c’ x same as x creates the vector x with the numbers between 1 and 5. You can see wh...Tags: Bioinformatics, Computational Biology, Education, Tutorial, R, Basics, Syntax, Data
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Comment on "Phylogenetic for Bioinformatics"
Nice tutorial https://www.zoology.ubc.ca/~bio336/Bio336/Lectures/Lecture14/Overheads.html584 days ago
Comment on "Basic command-line to run BLAST"
Detail tutorial here https://www.ncbi.nlm.nih.gov/books/NBK279684/614 days ago