BOL

Skewer!! http://sourceforge.net/projects/skewer/ #Seq #Omics #CutAdaptor

BITS bioinformatics tutorial http://libguides.mit.edu/content.php?pid=14149&sid=2198413 #Tutorial #BITS #Bioinformatics #Lecture #Video

The MaSuRCA genome assembler ! http://www.genome.umd.edu/masurca.html #GenomeAssembler #Seq

Suffix Trees ! http://www.cs.cmu.edu/~ckingsf/bioinfo-lectures/suffixtrees.pdf #SuffixTree #Pattern

The anatomy of successful computational biology software!! http://www.nature.com/nbt/journal/v31/n10/pdf/nbt.2721.pdf #computational biology #Bioinformatics #Seq

A New Online Computational Biology Curriculum http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003662 #Computational #Biology #Curriculum

A Quick Guide to Genomics and Bioinformatics Training for Clinical and Public Audiences http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003510 #Training

Export excel in R http://www.r-bloggers.com/importing-an-excel-workbook-into-r/ #R #Excel

Count the number of occurrence of pattern in a file using Perl. perl -e '$_ = <>; print scalar ( () = m/needle/g ), "\n"' #Perl #Perloneliner #Count #Occurrence

Count the number of "pattern" occurrence in a file grep -o 'pattern' anc.annots.gff | wc -l #Linux #grep #Count #Number #Occurrence

http://www.mycancergenome.org/ #CancerGenomeDB

Google will make Autism Public Genome DB!! http://live.wsj.com/video/google-autism-speaks-announce-public-genome-database/8AE3E89A-9062-461B-9ED5-7AE8D2AC445F.html#!8AE3E89A-9062-461B-9ED5-7AE8D2AC445

http://www.tfgdr.org/ #TreeFruitDB

Salmon genome decoded!! http://www.voanews.com/content/mapping-of-salmon-genome-could-aid-conservation-efforts-/1933835.html #Salmon #Seq #Omics

Nearest Neighbors!! http://www.science20.com/a_quantum_diaries_survivor/nearest_neighbors_an_algorithm_you_know-137796 #KNN #Algo