Results for "Single cell sequencing"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install sever...pers: moduleslibbio-samtools-perl - Perl interface to SamTools library for DNA sequencinglibbiojava-java - Java API to...3942 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a colle...uence blocks, regardless of whether it encompasses multiple genes, an area containing single gen...2602 days ago
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Bookmarks
Sequencing Solutions to World Health
"New technology that quickly, easily and economically reveals the genomes of viruses and pathogens transforms public health and medicine." Source: Life technologies3893 days ago
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling...onstrate that while existing tools are based on data generated from a specific sequencing technology, the models propos...1138 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical...d lipid-exposed faces of the TM domains. Results: In a cross validated test on single seq...3936 days ago
India's own first drug - from Biocon.
Psoriasis is immune-mediated disease that effects the skin. the Disease on an average...curs, when the immune system mistakes a normal skin cell for a pathogen, and sends out...aulty signals that cause overproduction of new skin cells. Mor...3911 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had a lot of...3943 days ago
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3936 days ago
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Pages
- Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balanced...Lisp, Dylan, Pike, and CLU. The standard 1.8.7 implementation is written in C, as a single-pas...
3939 days ago
- I found several useful bioinformatics articles which exaplain, define and elaborate the bioinformatics in sc...international 'HapMap' project cbsnews.com , Oct. 29, 2002. US stem cell polic...
3913 days ago
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Top-level pages
- The completion of the first human genome...s was just a start of the modern DNA sequencing era which resulted in further...ed strategies of high-throughput DNA sequencing, so called the “high-th...quo; (HT-NGS). The decreasing genome sequencing cost and desire to explore an...
3939 days ago
- ...on technology merge to form a single discipline. The ultimate goal...tein interactions; analysing single nucleotide polymorphisms to hunt...etail on the structure level. Single Nucleotide Polymorphisms can be m...h;219The Genome International Sequencing Consortium (2001) Initial seq...
3939 days ago
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Wire posts
News
- "Ludovic Orlando and Eske Willerslev , Centre for GeoGenetics have beaten sequencing of the ancient DNA recor...
3803 days ago
UK Genome Science Meeting, sept 2nd-4th, 2013
Following the success of the last three years' UK Next Gen Sequencing meetings at Nottingham, the newly named UK Genome Science mee...ture state of all aspects and applications of Next Generation Sequencing. More at >> http:...3910 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 la...y Scientific Cluster, is seeking a bioinformatician to analyze Next Generation Sequencing (NGS) data analysis. In the c...3940 days ago
- ...ure the behaviour of multiple cellular components, such as bioch...s, biophysical properties, subcellular localization and interact...t consists of high-throughput sequencing of DNA and mRNA of population...perience with high throughput sequencing analysis methods, machine lea...
3940 days ago
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ResearchLabs posts
- Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germ...nd microtubule organization in living cells, with an emphasis on mitosis...tosim, a computer simulation to study cellular architecture from a mecha...e in Systems Biology, and involved in Cell netwo...
3940 days ago
- The human genome project and similar projects in disease-causing organisms such as...ethods for analysis of structural variation in cancer genomes Next Generation sequencing in malaria Computational com...
3939 days ago
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Video
- View more AMAZING medical animations at http://www.nucleuslibrary.com To...Fertilization is the epic story of a single sperm facing incredible odds...ss of human fertilization. Shown at a cellular level magnification, sper..., genetic material from the egg and a single spe...
3809 days ago
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data...l graph theory and modern data structures, can be used to attack challenges in sequencing, medical genomics and biologi...3894 days ago
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Bio-Scripts
- #!/usr/bin/env perl # Usage: fastaRead.pl data.fa use strict; use warnings; my $filename = $ARGV[0]; my $sequence; open my $fileH, "
2906 days ago
Needleman-Wunsch Algorithm in Perl
#!/usr/bin/perl # USAGE: perl nw.pl HEAGAWGHEE PAWHEAE BLOSUM50.txt -8 # See: "Biological sequence anaysis" Durbin et al. ed. CUP 1998, Pg. 19 # Needleman-Wu...2897 days ago
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Polls
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high d...xplosion in biological data has resulted from genome projects, next generation sequencing and other 'omics' techniques....3408 days ago
Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?
Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?3189 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering an...t of the tools. Considering this, if the field carries on developing like this, every single res...2353 days ago
Groups
Python is a programming language that lets you work more quickly and integrate your.... Python and BioPython tutorial link @ https://sites.google.com/site/seqomics/sequencing/info-seq/python3937 days ago
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of the most popular technique scientific fraternity pursue worldwide to comprehand the genomic comple...3899 days ago
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Tags
Genomic approaches to study global regulation of gene expression in the mouse immune system
This group seeks to elucidate the principles of protein structure evolution, higher order protein structure and protein folding, and the principles underlying protein complex formation and organization. We have a longstanding interest in understanding gene expression regulation, and in our wetlab...Tags: Single cell sequencing, t-cell, immune cell, human cell atlas
2324 days ago
Postdoc position in computational biology/single-cell sequencing @ UCSF -- San Francisco, CA (US)
BACKGROUND A Postdoc position is available in the Diaz laboratory, at the University of California, San Francisco (diazlab.ucsf.edu). Our lab applies single-cell profiling, genomics and other assays to clinical samples, to address problems in neuro-oncology and neuro-development. RESPONSIBILITI...Tags: Neuro-Oncology, Single cell sequencing
2316 days ago
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