Blast result parser with Perl and Bioperl
#!/usr/local/bin/perl # # Dr. Xiaodong Bai # It may be freely distributed under GNU General Public License. # This script will parse a NCBI blastx output file and output the top N...2906 days ago
Installing pb-assembly on Linux !
...# # PacBio(R) tools distributed via Bioconda are: pre-release...# # As PacBio tools distributed via Bioconda are not covered...2026 days ago
Setting up falconUnzip conda environments for genome assembly !
...# # PacBio(R) tools distributed via Bioconda are: pre-release...# # As PacBio tools distributed via Bioconda are not covered...1981 days ago
Bash commandline to install Anaconda !
...stalling: clyent-1.2.2-py37_1 ... installing: cryptography-2.6.1-py37h1ba5d50_0 ... installing: cython-0.29.6-py37he6710b0_0 ... installing: distributed-1.26.0-py37_1 ... installing...1547 days ago
Commands to install conda in Ubuntu !
...stalling: clyent-1.2.2-py37_1 ... installing: cryptography-2.6.1-py37h1ba5d50_0 ... installing: cython-0.29.6-py37he6710b0_0 ... installing: distributed-1.26.0-py37_1 ... installing...1503 days ago
Install Varscan on Ubuntu / Linux !
...data. It was developed at the Genome Institute at Washington University and is hosted on github. To use Varscan we simply need to download the distributed jar file into our ~/workspace...815 days ago