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• • Jitendra Prajapati@jprajapati81

  

  Jitendra Prajapati answered the question how to determine @RG tags from a FastQ header?? 3828 days ago

  To see the read group information for a BAM file, use the following command. samtools view -H sample.bam | grep '@RG' Option Description of AddOrReplaceReadGroups INPUT (String) Input file (BAM or SAM or a GA4GH url). Required.OUTPUT (File)...
• • Nadia Baig@Nadia

  

  Nadia Baig asked how to determine @RG tags from a FastQ header?? 3830 days ago

  i have downloaded sra file and converted into paired end FastQ having following headers: @HWUSI-EAS754_0001:4:1:5605:1034#GCCAT The head and tail of file are as follow Head: ==> ERR042057_1.fastq...
• • Radha Agarkar@radhaagarkar

  

  Radha Agarkar posted a new ad in the Opportunity Post-Doctoral Fellow Jobs opportunity in SRM University 3832 days ago
• • Radha Agarkar@radhaagarkar

  

  Radha Agarkar is now a friend with Nabashis Kumar Misra 3832 days ago

  • Radha Agarkar@radhaagarkar

  

  • Nabashis Kumar Misra@nabashismisra

  
• • Nabashis Kumar Misra@nabashismisra

  

  Nabashis Kumar Misra is now a friend with Radha Agarkar 3832 days ago

  • Nabashis Kumar Misra@nabashismisra

  

  • Radha Agarkar@radhaagarkar

  
• • Radha Agarkar@radhaagarkar

  

  Radha Agarkar posted to the wire 3832 days ago

  Drag and drop programming language http://snap.berkeley.edu/ #Programming #Language
• • Radha Agarkar@radhaagarkar

  

  Radha Agarkar is now a friend with Arup Ghosh 3832 days ago

  • Radha Agarkar@radhaagarkar

  

  • Arup Ghosh@arup

  
• • Arup Ghosh@arup

  

  Arup Ghosh is now a friend with Radha Agarkar 3832 days ago

  • Arup Ghosh@arup

  

  • Radha Agarkar@radhaagarkar

  
• • Jit@jit.aber

  

  Jit posted to the wire 3833 days ago

  Perl common flags http://perldoc.perl.org/functions/-X.html # Perl #Flags #Trick
• • Nadia Baig@Nadia

  

  Nadia Baig is now a friend with Jitendra Prajapati 3834 days ago

  • Nadia Baig@Nadia

  

  • Jitendra Prajapati@jprajapati81

  
• • Jitendra Prajapati@jprajapati81

  

  Jitendra Prajapati is now a friend with Nadia Baig 3834 days ago

  • Jitendra Prajapati@jprajapati81

  

  • Nadia Baig@Nadia

  
• • Poonam Mahapatra@poonam

  

  Poonam Mahapatra posted to the wire 3835 days ago

  #Newick #Utilities #Tutorial http://cegg.unige.ch/system/files/nwutils_tutorial.pdf
• • sanjeet kumar@ksanjeet

  

  sanjeet kumar is now a friend with Poonam Mahapatra 3835 days ago

  • sanjeet kumar@ksanjeet

  

  • Poonam Mahapatra@poonam

  
• • Poonam Mahapatra@poonam

  

  Poonam Mahapatra is now a friend with sanjeet kumar 3835 days ago

  • Poonam Mahapatra@poonam

  

  • sanjeet kumar@ksanjeet

  
• • sanjeet kumar@ksanjeet

  

  sanjeet kumar is now a friend with Jitendra Narayan 3835 days ago

  • sanjeet kumar@ksanjeet

  

  • Jitendra Narayan@admin

  
• • Jitendra Narayan@admin

  

  Jitendra Narayan is now a friend with sanjeet kumar 3835 days ago

  • Jitendra Narayan@admin

  

  • sanjeet kumar@ksanjeet

  
• • Poonam Mahapatra@poonam

  

  Poonam Mahapatra commented on the blog List of gene ontology software and tools 3835 days ago

  Thanks for such a useful list of tools for GO study. I found FUNC: a package for detecting significant associations between gene sets and ontological annotations (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1800870/) also very useful.
• • Poonam Mahapatra@poonam

  

  Poonam Mahapatra answered the question Is there any database other than GEO ncbi, ncbi src database to get exome data?? 3835 days ago

  You can also look at http://exac.broadinstitute.org/ server for many exome...
• • Archana Malhotra@archana

  

  Archana Malhotra answered the question Is there any database other than GEO ncbi, ncbi src database to get exome data?? 3835 days ago

  Hi Nadia, Did you have a look at http://evs.gs.washington.edu/EVS/ and http://www.1000genomes.org/data hope you will find exome of interest here. Thanks
• • Archana Malhotra@archana

  

  Archana Malhotra commented on the blog Computer simulation of genetic mechanism !! 3835 days ago

  Thanks for such a useful list of tool for simulation studies. I guess you forgot to add RSVSim: an R/Bioconductor package for the simulation of structural variations ( https://www.bioconductor.org/packages/release/bioc/html/RSVSim.html ) in the list.

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