BOL

Useful links  https://towardsdatascience.com/introduction-to-genetic-algorithms-including-example-code-e396e98d8bf3 https://github.com/memento/GeneticAlgorithm

The Docker image is available at https://hub.docker.com/r/biodatageeks/. Supplementary information on benchmarking procedure as well as test data are publicly accessible at the project documentation...

This study reports sequence from 1,267 individuals that includes 598 individuals representing 55 ethnic groups that span the major language groups across India.

http://www.nrcpb.res.in/writereaddata/files/opportunities/ICAR-NASF%20RA%20SRF%20interview%202019-converted_0.pdf #NIPB #Plant #WalkIn

Bioinformatics jobs at Nevada, USA https://www.unlv.edu/news-story/open-job-positions

A “#Forward #Genomics” Approach Links #Genotype to #Phenotype using Independent Phenotypic Losses among Related Species https://www.cell.com/cell-reports/fulltext/S2211-1247(12)00272-0

So you want to be a computational biologist? https://www.nature.com/articles/nbt.2740 #computational_biology #bioinformatics

Check out bioinformatics jobs in Australia  https://www.abacbs.org/jobs-detailed

phyloXML (example) is an XML language designed to describe phylogenetic trees (or networks) and associated data. PhyloXML provides elements for commonly used features, such as taxonomic information, gene names and identifiers, branch...

https://github.com/crazyhottommy/getting-started-with-genomics-tools-and-resources/blob/master/Next%20Generation%20Sequencing%20spreadsheet%20-%20T.tsv #NGS #CheatSheet

#BlobToolKit can be used during #assembly to filter non-target DNA, helping researchers produce assemblies with high biological credibility. https://blobtoolkit.genomehubs.org/view #Genome #Blob #Con

Miniasm is a great long-read assembly tool: straight-forward, effective and very fast. However, it does not include a polishing step, so its assemblies have a high error rate – they are essentially made of stitched-together pieces of long...

Perl script to run in parallel https://perlmaven.com/speed-up-calculation-by-running-in-parallel #Perl #Parallel #Script #Core #Thread

RepeatModeler2 represents a valuable addition to the genome annotation toolkit that will enhance the identification and study of TEs in eukaryotic genome sequences. RepeatModeler2 is available as source code or a containerized package under an open...

Perl onliner to add string to each of the fasta header. $ perl -p -e 's/^(>.*)$/$1-origin/g' in.fasta > out.fasta #String #Header #Fasta