BOL

International Journal of Biometrics and Bioinformatics accept Bioinformatics research articles. Impact 1.18 http://www.cscjournals.org/journals/IJBB/description.php

RA walkin at NBAIM, Mau http://nbaim.org.in/shownews.aspx?code=ed99851b-07c1-4a5c-91e1-53fd02936fdc #RA #Mau #NBAIM

RNAcon is a web-server for the prediction and classification of non-coding RNAs. It uses SVM-based model for the discrimination between coding and ncRNAs and RandomForest-based prediction model for the classification of ncRNAs into different...

There are many websites available but i suggest you to start with the basic and then advance. Follow the procedure Try to focus on Data Structure and Algorithm from GeeksforGeeks | A computer science portal for geeks . First try to...

https://longhowlam.wordpress.com/2017/07/13/interactive-sunburst-graphs-in-power-bi-in-5-minutes/ #R #sunburst #plot

GView is a Java application for viewing and examining prokaryotic genomes in a circular or linear context. It accepts standard sequence file formats and an optional style specification file to generate customizable, publication quality genome maps...

Rename #non-accepted #nucleotide from sequence to 'N' $ bbmap/reformat.sh in=genome.fa out=genomeOut.fa iupacToN=t

Asst #Professor #Bioinformatics #pondicherry university @ http://www.pondiuni.edu.in/sites/default/files/0_Application_0.pdf

DNA testing companies across world

It is often necessary to import sample textbook data into R before you start working on your homework. Excel File Quite frequently, the sample data is in Excel format, and needs to be imported into R prior to use. For this, we can...

perlbrew is an admin-free perl installation management tool. The latest version is 0.79, read the release note: Release 0.79.  Copy & Paste this line into your terminal: \curl -L https://install.perlbrew.pl | bash Or, if your...

#Plot data along #chromosome #ideograms https://bioconductor.org/packages/devel/bioc/vignettes/IdeoViz/inst/doc/Vignette.pdf #IdeoViz

DISCO is a multi threaded and multiprocess distributed memory overlap-layout-consensus (OLC) metagenome assembler. Disco was developed as a scalable assembler to assemble large metagenomes from billions of Illumina sequencing reads of complex...

https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/lecture-slides/MIT7_91JS14_Lecture6.pdf

#Assembly #Algorithms for #Next-Generation Sequencing Data https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2874646/

#Filter out #reads with #size to discard reads containing many Ns. BBNorm ( https://sourceforge.net/projects/bbmap/ )

#Sickle ( https://github.com/najoshi/sickle ) to #trim #reads using a 20-Phred quality threshold

Omega found overlaps between reads using a prefix/suffix hash table. The overlap graph of reads was simplified by removing transitive edges and trimming short branches. Unitigs were generated based on minimum cost flow analysis of the overlap graph...