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When I tried Perl on my cluster/server it gives following error !! How to resolve it? $ perlperl: warning: Setting locale failed.perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LC_PAPER =...

Cgaln (Coarse grained alignment) is a program designed to align a pair of whole genomic sequences of not only bacteria but also entire chromosomes of vertebrates on a nominal desktop computer. Cgaln performs an alignment job in two steps, at the...

When I tried Perl on my cluster/server it gives following error !! How to resolve it? $ perlperl: warning: Setting locale failed.perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LC_PAPER =...

When I tried Perl on my cluster/server it gives following error !! How to resolve it? $ perlperl: warning: Setting locale failed.perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LC_PAPER =...

When I tried Perl on my cluster/server it gives following error !! How to resolve it? $ perlperl: warning: Setting locale failed.perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LC_PAPER =...

BBMAP tools descriptions https://github.com/BioInfoTools/BBMap/blob/master/docs/ToolDescriptions.txt

App::cpanminus looks intersting, I will give it a try. This webpage also explain various approaches. http://web.archive.org/web/20120427144232/http://perl.jonallen.info/writing/articles/install-perl-modules-without-root Hope useful.

The easy way to #build stand-alone #Perl #apps http://perltricks.com/article/58/2014/1/5/The-easy-way-to-build-stand-alone-Perl-apps/

Find the DIRs in Linux: $ find / -name "DIR_NAME" #Linux #Find #DIR

I found App::cpanminus very handy in such cases. It create a local Perl5 directory in you profile. wget -O- http://cpanmin.us | perl - -l ~/perl5 App::cpanminus local::lib eval `perl -I ~/perl5/lib/perl5 -Mlocal::lib` echo 'eval `perl -I...

Check out the OS type: $ cat /etc/*-release #Linuxv #OS

I am problem installing Perl module on cluster/server without root. Can you please recommend me a easy way or alternative way to install it.

#GAP-Seq: a method for identification of DNA #palindromes http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-394

Bioinformatics postdocs at http://evol.mcmaster.ca/cgi-bin/my_wrap/brian/evoldir/PostDocs/

The DAGchainer software computes chains of syntenic genes found within complete genome sequences. As input, DAGchainer accepts a list of gene pairs with sequence homology along with their genome coordinates. Using a scoring function which accounts...

Yes you are right at some extend :| You should check this paper, http://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-8-204 it provide a comparative table of all the available genome/chromosome visualization tools. Hope few of them...