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- Abhi@abhinav
Abhi commented on the bio-script Download desire version of Blast software ! 1143 days ago

Blast v2.12 wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ncbi-blast-2.12.0+-x64-linux.tar.gz
- Abhi@abhinav
Abhi bookmarked Code Golf 1143 days ago

Code Golf is a game designed to let you show off your code-fu by solving problems in the least number of characters. Since this is your first time here, I suggest starting with something simple like Fizz Buzz.

https://code.golf/
- Abhi@abhinav
Abhi commented on the bio-script Download desire version of Blast software ! 1143 days ago

Blast database version 4 @ https://ftp.ncbi.nlm.nih.gov/blast/db/v4/
- Abhi@abhinav
Abhi created a new bio-script Download desire version of Blast software ! 1143 days ago
Comments
- Abhi@abhinav
  
  Abhi 1143 days ago
  Blast database version 4 @ https://ftp.ncbi.nlm.nih.gov/blast/db/v4/
- Abhi@abhinav
  
  Abhi 1143 days ago
  Blast v2.12
  wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ncbi-blast-2.12.0+-x64-linux.tar.gz
- Abhi@abhinav
  
  Abhi 1143 days ago
  Latest blast software and old versions
  https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/
- Abhi@abhinav
Abhi bookmarked OGDRAW - Draw Organelle Genome Maps 1144 days ago

OrganellarGenomeDRAW converts annotations in the GenBank or EMBL/ENA format into graphical maps. The input has to be a GenBank or EMBL/ENA flat file wherase the output can vary among several types of files....

https://chlorobox.mpimp-golm.mpg.de/OGDraw.html
- Abhi@abhinav
Abhi created a new bio-script Command line to download blast database / protein 1144 days ago
- Neel@neelam
Neel published a blog post REST API 1145 days ago

REST API The Representational State Transfer (REST) sample clients are provided for a number of programming languages.
- Neel@neelam
Neel posted to the wire 1146 days ago

Command Line BLAST https://open.oregonstate.education/computationalbiology/chapter/command-line-blast/ #blastp #blastn #blastx #tblastn #blastx
- Neel@neelam
Neel commented on the bio-script Command line to create blast uniref database ! 1146 days ago

wget ftp://ftp.uniprot.org/pub/databases/uniprot/uniref/uniref90/uniref90.fasta.gz gunzip -v uniref90.fasta.gz makeblastdb -in uniref90.fasta -dbtype prot -input_type fasta -out uniref90.fasta
- Neel@neelam
Neel posted a new ad in the Opportunity Senior Bioinformatician (Assembly) Moore Aquatic Symbiosis Project Tree of Life 1147 days ago
- Neel@neelam
Neel posted a new ad in the ResearchLabs Cáceres Lab 1147 days ago
- Neel@neelam
Neel bookmarked VolcaNoseR - Exploring volcano plots 1149 days ago

Plot volcano plots online .... VolcaNoseR - Exploring volcano plots

https://huygens.science.uva.nl/VolcaNoseR/
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary posted to the wire 1149 days ago

Open in terminal of Linux sudo apt-get install nautilus-extension-gnome-terminal #Terminal #Linux
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary created a new bio-script Get the Linux system information ! 1149 days ago
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary created a new bio-script Bash script for getopts 1150 days ago
- Neel@neelam
Neel posted to the wire 1150 days ago

Volcano plots https://biocorecrg.github.io/CRG_RIntroduction/volcano-plots.html #Plots #Volcano
- Neel@neelam
Neel created a new bio-script Inreractive SCP / File transfer ! 1151 days ago

Surabhi Chaudhary created a new bio-script Command line to create blast uniref database ! 1151 days ago

Comments

Neel 1146 days ago

wget ftp://ftp.uniprot.org/pub/databases/uniprot/uniref/uniref90/uniref90.fasta.gz
gunzip -v uniref90.fasta.gz
makeblastdb -in uniref90.fasta -dbtype prot -input_type fasta -out uniref90.fasta

- Surabhi Chaudhary@surabhi
Surabhi Chaudhary posted to the wire 1151 days ago

https://hbctraining.github.io/DGE_workshop/lessons/02_DGE_count_normalization.html #DGE #Normalize #R
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary created a new bio-script blastpgp arguments ! 1151 days ago

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