BOL: All Site Activity

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- Neel@neelam
Neel bookmarked MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization 1647 days ago

MitoZ, consisting of independent modules of de novo assembly, findMitoScaf (find Mitochondrial Scaffolds), annotation and visualization, that can generate mitogenome assembly together with annotation and visualization results from HTS raw...

https://github.com/linzhi2013/MitoZ
- Jit@jit.aber
Jit created a new bio-script Run Pango on your multifasta file ! 1648 days ago
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary created a new bio-script Extract fasta sequences with ids in another file ! 1650 days ago
- Jit@jit.aber
Jit posted to the wire 1651 days ago

Bioinformatics PhD position at https://evotecgroup.wd3.myworkdayjobs.com/en-US/Evotec_Career_Site/job/Toulouse/Bioinformatics-Scientist-RNA-PhD-Level--F-M-_REQ-03521
- Jit@jit.aber
Jit published a blog post Classification of SARS-CoV2 Variant ! 1652 days ago

The scientists established some guidelines for determining whether a variant is a legitimate branch of an existing lineage:
- Jit@jit.aber
Jit created a page Installing ELGG on Ubuntu ! 1653 days ago

Follow this: Settings file Error Your web server does not have permission to create the settings.php file in your installation directory. You have two choices: 1. Change the permissions on the elgg-config directory of your Elgg...
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- Neel@neelam
  
  Neel 1472 days ago
  sudo apt-get -y --reinstall install phpmyadmin; sudo service apache2 restart;
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary commented on the bio-script Extract the values using ids ! 1655 days ago

Join could be also useful linux_prompt> join file1 file2 11002 item 6 10995 item 7 79600 item 7
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary created a new bio-script Extract the values using ids ! 1655 days ago
Comments
- Surabhi Chaudhary@surabhi
  
  Surabhi Chaudhary 1655 days ago
  Join could be also useful
  linux_prompt> join file1 file2 11002 item 6 10995 item 7 79600 item 7
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary created a new bio-script Split the string with underscore and store values in array with AWK ! 1655 days ago
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary created a new bio-script Awk build in commands ! 1655 days ago
- Abhi@abhinav
Abhi posted to the wire 1662 days ago

The CPC sever accepts RNA #transcript sequences as input, and outputs assessed #protein-coding potential of the transcripts. http://cpc2.gao-lab.org/about.php
- Abhi@abhinav
Abhi posted to the wire 1662 days ago

Merge transcriptome assemblies https://github.com/cboursnell/transfuse #Transfuse #Fuse #Merge
- Abhi@abhinav
Abhi posted to the wire 1662 days ago

Tools for building de novo transcriptome assembly https://www.sciencedirect.com/science/article/pii/S2214662817301032 #Trnscripttomics #Assembly
- Abhi@abhinav
Abhi posted to the wire 1662 days ago

#Snakemake #Learn https://ucdavis-bioinformatics-training.github.io/2020-Genome_Assembly_Workshop/snakemake/snakemake_intro
- Abhi@abhinav
Abhi created a new bio-script Rules to run fastp / Snakemake ! 1662 days ago
- Abhi@abhinav
Abhi asked Palgoin installation return this warning ? 1662 days ago

For Linux 64, Open MPI is built with CUDA awareness but this support is disabled by default.To enable it, please set the environment variable OMPI_MCA_opal_cuda_support=true beforelaunching your MPI processes. Equivalently, you can set the MCA...
- Abhi@abhinav
Abhi bookmarked Fix rewritable error of ELGG ! 1663 days ago

The mod_rewrite module uses a rule-based rewriting engine, based on a PCRE regular-expression parser, to rewrite requested URLs on the fly. By default, mod_rewrite maps a URL to a filesystem path. However, it can also be used to...

https://www.digitalocean.com/community/tutorials/how-to-rewrite-urls-with-mod_rewrite-for-apache-on-ubuntu-18-04
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- Neel@neelam
  
  Neel 1472 days ago
  
  sudo systemctl restart apache2
  
  Now, create an .htaccess file in the web root.
  
  sudo nano /var/www/html/.htaccess
  
  Add this line at the top of the new file to activate the rewrite engine.
  /var/www/html/.htaccess
  RewriteEngine on
  Save the file and exit.
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary commented on the bio-script Update Pangolin ! 1663 days ago

$ pangolin --updatepangolin updated to v3.1.16pangoLEARN updated to 2021-11-04
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary created a new bio-script Update Pangolin ! 1663 days ago
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- Surabhi Chaudhary@surabhi
  
  Surabhi Chaudhary 1663 days ago
  $ pangolin --update
  pangolin updated to v3.1.16
  pangoLEARN updated to 2021-11-04
- Abhi@abhinav
Abhi bookmarked Pango Lineage Analysis ! 1663 days ago

The Pango nomenclature is being used by researchers and public health agencies worldwide to track the transmission and spread of SARS-CoV-2, including variants of concern. This website documents all current Pango lineages and their spread, as well...

https://cov-lineages.org/resources/pangolin/output.html

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