Hello, I am looking for a program/function that converts different sources of IDs to Symbol IDs. The script in R will be an added advantage ...

Thanks

Hi! I have downloaded the latest version of blast+ from the FTP site. I know upto changing the directory and it came to bin.. How can i run the sequences? I read user manual but i cant understood.. help me

I am currently using a s/// regex like this: $str =~ s/$find/$replace/g;

Looking for some other quicker way for the same.

Thanks

Hi!

Currently i am working in miRNA identification based on EST of particular animal.. i did blastn search against the EST to identify the homologous of mature miRNA.. Next step is blastx to remove the protein coding sequences. How can i select the non-coding transcripts or EST's from those results? On what criteria i have to select?? Then I want to know how to select the range of precursors and mature miRNA? Based on secondary structure means how they find the mature miRNA? I read many articles but i am still not clear how to find those.. If anyone know plz help me..

Thanks,

Nandhini

I have visited many websites but still unable to clearly distinguish them.

How can I convert .pdb/smiles/.mol files into .mae format by using schrodinger software in windows OS (2009 version). I tried to do it with open bable, but im unable to find .mae format in openbable. please somebody help me.

thank you

Hi Bioinformatician,

I am newbie bioinformatician interested in knowing something more about next generation sequencing (NGS) and learn to interpret the data obtained from these technologies. In particular I want to know what kind of analyses is possible to perform on these data and what kind of tools can be used to achieve results. Other needs:

Where can I find information or a tutorial?

Does anyone know where I could start?

Any good book, website, tutorial are welcome?

Thanks for your time.

Thanks

We are traditional web developer for bioinformatics related problem. Nowadays mobile apps are becoming very popular. My question is should we also develop Apps in addition to web services for biology related problem. According to you what is scope of "Apps based Bioinformatics". We need your frank opinion from user as well as developers point of view.