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R and Bioconductor
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- Rahul Nayak@rahul
Rahul Nayak commented on a bookmark R and Bioconductor Tutorial 3443 days ago

Welcome to a Little Book of R for Bioinformatics http://a-little-book-of-r-for-bioinformatics.readthedocs.org/en/latest/
- Rahul Nayak@rahul
Rahul Nayak commented on a bookmark R and Bioconductor Tutorial 3443 days ago

Genes and genome with R https://www.ebi.ac.uk/training/sites/ebi.ac.uk.training/files/materials/2013/131021_HTS/genesandgenomes.pdf
- Rahul Nayak@rahul
Rahul Nayak replied on the discussion topic Which are the best statistical programming languages to study for a bioinformatician? 3466 days ago

A nice comparision between R, SAS and Python http://www.datasciencecentral.com/forum/topics/which-one-is-best-r-sas-or-python-for-data-science
- Rahul Nayak@rahul
Rahul Nayak published a blog post One page R survival guide !! 3466 days ago

There any many of the documents have been developed and tested by scientist around the world.
- Neel@neelam
Neel published a news post R 3.2.0 is released 3507 days ago

R 3.2.0 (codename “Full of Ingredients”) was released yesterday.
- Archana Malhotra@archana
Archana Malhotra created a page A guide for complete R beginners :- Installing R packages 3559 days ago

Part of the reason R has become so popular is the vast array of packages available at the cran and bioconductor repositories. In the last few years, the number of packages has grown exponentially! This is a short post giving steps on how to...
- Archana Malhotra@archana
Archana Malhotra created a page A guide for complete R beginners :- Getting data into R 3559 days ago

For a beginner this can be is the hardest part, it is also the most important to get right. It is possible to create a vector by typing data directly into R using the combine function ‘c’ x same as x creates the vector x...
- Jit@jit.aber
Jit commented on a bookmark RStudio 3559 days ago

RStudio v0.99.292 Preview — Release Notes A preview release of RStudio v0.99.292 is now available for testing and feedback. Highlights include: Data viewer with support for large datasets, filtering, searching, and sorting. Complete...
- Archana Malhotra@archana
Archana Malhotra created a page A guide for complete R beginners :- R Syntax 3563 days ago

R is a functional based language, the inputs to a function, including options, are in brackets. Note that all dat and options are separated by a comma Function(data, options) Even quit is a function q() So is...
- Archana Malhotra@archana
Archana Malhotra created a page A guide for complete R beginners ! 3563 days ago

This tutorial is intended to introduce users quickly to the basics of R, focusing on a few common tasks that biologists need to perform some basic analysis: load a table, plot some graphs, and perform some basic statistics. More...
- Jitendra Narayan@admin
Jitendra Narayan published a news post R for Microsoft Excel 3566 days ago

An R tutorial for Microsoft Excel users
- Rahul Nayak@rahul
Rahul Nayak published a news post Pacman 3568 days ago

The pacman package is an R package management tool that combines the functionality of base library related functions into intuitively named functions.
- Jitendra Narayan@admin
Jitendra Narayan replied on the discussion topic Which are the best statistical programming languages to study for a bioinformatician? 3610 days ago

The recent article on Nature explain it better ... R becoming the most popular language amongst biological researchers http://www.nature.com/news/programming-tools-adventures-with-r-1.16609?
- Jitendra Narayan@admin
Jitendra Narayan bookmarked RStudio 3619 days ago

RStudio IDE is a powerful and productive user interface for R. It’s free and open source, and works great on Windows, Mac, and Linux. The developers and expert trainers are the authors of several popular R packages, including ggplot2, plyr,...

http://www.rstudio.com/
Comments
- Jit@jit.aber
  
  Jit 3559 days ago
  RStudio v0.99.292 Preview — Release Notes
  A preview release of RStudio v0.99.292 is now available for testing and feedback. Highlights include:
  
  Data viewer with support for large datasets, filtering, searching, and sorting.
  
  Complete overhaul of R code completion with many new features and capabilities.
  
  C/C++ editing mode: completion, code navigation, find usages, and automatic indentation.
  
  Source editor improvements including multiple cursors, tab re-ordering, and several new themes.
  
  Enhanced Vim mode with visual block selection, macros, marks, and subset of : commands.
  
  Updated UI rendering engine for improved overall responsiveness.
  
  See v0.99.292 Release Notes for full details on all of the changes in this release.
  More at http://www.rstudio.com/products/rstudio/download/preview/
- Rahul Nayak@rahul
Rahul Nayak published a news post translate2R 3655 days ago

Migrate SPSS scripts to R at the push of a button
- Martin Jones@martin
Martin Jones published a news post dcGOR 3668 days ago

an R package for analysing ontologies and protein domain annotations
- Jit@jit.aber
Jit published a news post Surrogate Variable Analysis (SVA) 3677 days ago

The sva package contains functions for removing batch effects and other unwanted variation in high-throughput experiment.
- Abhimanyu Singh@abhimanyu
Abhimanyu Singh commented on a page titled Next generation sequencing in R or bioconductor environment 3725 days ago

UNDO: a Bioconductor R package for unsupervised deconvolution of mixed gene expressions in tumor samples http://bioinformatics.oxfordjournals.org/content/early/2014/09/10/bioinformatics.btu607.abstract
- Robert M Willioms@robert
Robert M Willioms commented on a bookmark R and Bioconductor Tutorial 3727 days ago

R for epigenetics http://www.bristol.ac.uk/caite/geocode/newcastleshortcourse/bioinformaticstoolsforepigen.pdf
- Rahul Agarwal@raag
Rahul Agarwal commented on a bookmark R and Bioconductor Tutorial 3730 days ago

Tableau (statistical horsepower of R with user-friendly visual analytics) http://www.tableausoftware.com

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