github.com - gapFinisher to process SSPACE-LongRead output to fill gaps after the scaffolding. gapFinisher is based on the controlled use of a previously published gap filling tool FGAP and works on all standard Linux/UNIX command...
github.com - SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. SqueezeMeta includes multi-metagenome support allowing the co-assembly of related metagenomes and the retrieval of individual genomes...
github.com - The pipeline was developed based on a popular workflow framework Nextflow, composed of four core procedures including reads alignment, assembly, identification and quantification. It contains various unique features such as well-designed...
github.com - medaka is a tool to create a consensus sequence from nanopore sequencing data. This task is performed using neural networks applied from a pileup of individual sequencing reads against a draft assembly. It outperforms graph-based methods...
www.oreilly.com - BioCoder features:
Novel therapeutic discovery strategies
Hardware such as low-cost lab equipment or diagnostics
Open or low-cost bioinformatics tools
Engineered organisms for the production of small molecules, biologics, or other...
researchrabbitapp.com - You’re determined students, passionate teachers, and inspired creators of everything we know! Yet, all the researchers we spoke with over the past year uncovered the same reality:
Despite the degrees you’ve earned, the effort and...