Jit
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IVA: accurate de novo assembly of RNA virus genomes
By Neel 1938 days agogithub.com - IVA (Iterative Virus Assembler) designed specifically for read pairs sequenced at highly variable depth from RNA virus samples. We tested IVA on datasets from 140 sequenced samples from human immunodeficiency virus-1 or influenza-virus-infected...NIAB Molecular Biology/Bioinformatics Scientist/RA Openings
D. No. 1-121/1, 4th and 5th Floors, Axis Clinicals Building, Miyapur, Hyderabad, Telangana, India- 500 049 Email: admin@niab.org.in Telephones: +91 40 2304 9403 Telefax: +91 40 2304 2740 Advertisement No: 5/2014 About NIAB National Institute...Bioinformatics JRF/RA/SRF position at PANJAB UNIVERSITY
CENTRE FOR SYSTEMS BIOLOGY & BIOINFORMATICS UIEAST, PANJAB UNIVERSITY, CHANDIGARH Applications are invited along with complete bio-data and attested copies of certificates of qualifications, experience etc. for the one post of Research...Illumina based assembly pipeline steps !
By Surabhi Chaudhary 1768 days agoGenome assembly pipeline !Bioinformatics SUB DIC (DIC)
Project Title BIOINFORMATICS SUB DIC (DIC) Reference Number IIT/SRIC/R/DIC/2014/314, DATED 28thNovember, 2014 Temporary Position(s) i) Junior/ Senior Project Officer (1) ii) Junior Project Assistant (2) Consolidated Compensation i)...chromeister: An ultra fast, heuristic approach to detect conserved signals in extremely large...
By Jit 1713 days agogithub.com - chromeister: An ultra fast, heuristic approach to detect conserved signals in extremely large pairwise genome comparisons. USAGE: -query: sequence A in fasta format -db: sequence B in fasta format -out: output matrix -kmer Integer: k>1...Internship Program for Bioinformatics / Biotechnology / MBA / MCA (No. Of Vacancy: 5)
ArrayGen is offering an Internship Program for Post graduate Bioinformatics / Biotechnology / MBA / MCA students and professionals. ArrayGen Technologies provide an excellent opportunity to gain research experience and explore if a scientific career...GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations
By Neel 1608 days agogithub.com - The GenomeQC web application is implemented in R/Shiny version 1.5.9 and Python 3.6 and is freely available at https://genomeqc.maizegdb.org/ under the GPL license. All source code and a containerized version of the GenomeQC pipeline is...irishgrid: Irish Grid Mapping System
By Jit 4309 days agocode.google.com - Perl module for creating geographic 10km-square maps using either SVG or PNG (with GD library) output format. Originally design to map the location of objects in a 10 km map IrishGrid includes: native support of the Irish Grid System (see...PhyloHerb: A high‐throughput phylogenomic pipeline for processing genome skimming data
By Abhi 1133 days agogithub.com - Phylogenomic Analysis Pipeline for Herbarium Specimens What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimming data collected from plant materials. The outcomes include the plastid genome (plastome) assemblies,...
