Jit
Enthusiast computational biologist with business dream !!!
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SENIOR PROGRAMMER @ Biotech Park
Advt. No. (1)/BP/2014 A walk-in-interview will be held in the Biotech Park Office at Sector G, Jankipuram, Kursi Road, Lucknow (U.P.) January 31, 2014 at 11.00 A.M. for the following posts of DBT sponsored project tenable at Biotech Park....BASE: a practical de novo assembler for large genomes using long NGS reads
By Rahul Nayak 2272 days agogithub.com - new de novo assembler called BASE. It enhances the classic seed-extension approach by indexing the reads efficiently to generate adaptive seeds that have high probability to appear uniquely in the genome. Such seeds form the basis for BASE...Post-doc in Genomics of Fungi
Post-doc in Genomics of Fungi Fungi are of central importance for the global carbon cycle because of their role in the degredation of complex organic matter such as plant material. Fungi also represent one of the last frontiers...nQuire: A statistical framework for ploidy estimation using NGS short-read data
By Jit 2168 days agogithub.com - nQuire implements a set of commands to estimate ploidy level of individuals from species, where recent polyploidization occurred and intraspecific ploidy variation is observed. Specifically, nQuire uses next-generation sequencing data to distinguish...Internships @ Indian Institute of Science
Internships available for Bachelors and Masters students Each node will host student interns interested in pursuing a research career in mathematical or computational biology at institutions located in its region. Eligibility: Bachelors (3rd...ClinCNV: Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
By Neel 1818 days agogithub.com - ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-genome). We work in cohorts, so it makes sense to try ClinCNV if you have more than 10 samples (recommended amount - 40 since we estimate variances from...LoFreq*: A sequence-quality aware, ultra-sensitive variant caller for NGS data
By BioStar 1786 days agocsb5.github.io - LoFreq* (i.e. LoFreq version 2) is a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data. It makes full use of base-call qualities and other sources of errors inherent in sequencing (e.g. mapping or...RCB Gurgaon Bioinformatics RA/PA Openings
Advt. No.1/2014 Recruitment for Research Associate and Project Assistant positions Regional Centre for Biotechnology (RCB) is an autonomous academic institution established by the Department of Biotechnology, Govt. of India with regional and...FiNGS: Filters for Next Generation Sequencing
By Neel 1411 days agogithub.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...Update Genome Workbench 2.7.15 released
By Surabhi Chaudhary 3968 days agoNCBI Genome Workbench updates with important bugs fixed.
