BOL

converting a VCF file into a FASTA file given a reference sequence

Roslin Bioinformatics Group The Law group provides internal Institute-specific development, training and support roles for data manipulation, sequence analysis and any other aspect of the analysis of biological data using computer systems....

github.com - LR_Gapcloser is a gap closing tool using long reads from studied species. The long reads could be downloaed from public read archive database (for instance, NCBI SRA database ) or be your own data. Then they are fragmented and aligned to scaffolds...

Institution/Company: University of Calgary Location: Calgary, AB Job Description: Novel diagnostic platform for detection of Osteoarthritis I invite applications from highly motivated individuals to join my laboratory as a PhD student...

Job Description: three postdoc positions in computational biology are available at the Center for Genomic Science in Milan (Italy): - Development of computational methods to investigate the interplay between epigenetic and genetic layers and...

github.com - Synima written in Perl, which uses the graphical features of R. Synima takes orthologues computed from reciprocal best BLAST hits or OrthoMCL, and DAGchainer, and outputs an overview of genome-wide synteny in PDF. Each of these programs are included...

The main objectives of this Practical Course are to strengthen skills of PhD students and young researchers in the domain of Bioinformatics and Genome Data Analyses on the use of advanced fundamental algorithms and their applications in genome...

http://ani.mypathogen.cn/ - ANItools is a software package written by PERL scripts that can be run in a Linux/Unix system. If you want to compare bacterial genomes and calculate their average nucleotide identity (ANI), you could download and run this program directly. Or you...

Mitochondrial Genome of a 400,000-Year-Old Hominin from Spain Decoded

Open source software is software that can be freely used, changed, and shared (in modified or unmodified form) by anyone. Open source software is made by many people, and distributed under licenses that comply with the Open Source Definition.The...