Jit
Enthusiast computational biologist with business dream !!!
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lordFAST: sensitive and Fast Alignment Search Tool for LOng noisy Read sequencing Data
By BioJoker 2660 days agogithub.com - lordFAST is a sensitive tool for mapping long reads with high error rates. lordFAST is specially designed for aligning reads from PacBio sequencing technology but provides the user the ability to change alignment parameters depending on the reads...Kraken: ultrafast metagenomic sequence classification using exact alignments
By Jit 3543 days ago Comments (1)www.ncbi.nlm.nih.gov - Kraken is an ultrafast and highly accurate program for assigning taxonomic labels to metagenomic DNA sequences. Previous programs designed for this task have been relatively slow and computationally expensive, forcing researchers to use faster...MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer...
By Rahul Nayak 1413 days agogithub.com - MUM&Co is able to detect:Deletions, insertions, tandem duplications and tandem contractions (>=50bp & <=150kb)Inversions (>=1kb) and translocations (>=10kb)NIPGR Hires Research Associate, JRF, Laboratory Assistant
National Institute of Plant Genome Research (NIPGR), Aruna Asaf Ali Marg - Delhi, Delhi ₹15,000 a month National Institute of Plant Genome Research (NIPGR) invites applications to recruit on vacant posts of Research Associate (RA), Junior...DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
By Jit 1820 days ago Comments (1)github.com - DAVI consists of models for both global and local alignment and for variant calling. We have evaluated the performance of DAVI against existing state-of-the-art tool sets and found that its accuracy and performance is comparable to existing tools...RA Bioinformatics at National Bureau of Fish Genetic Resources
F.No. 1(16)/2016-Admn. (DBT-BBSRC Project) Research Associate /JRF Biotechnology Job vacancies in National Bureau of Fish Genetic Resources on contract basis Research Associate /01 Post Essential: Ph.D. in Bioinformatics or 03 years research...ACANA: An accurate and consistent alignment tool for DNA sequences
By Jit 3016 days agowww.niehs.nih.gov - ACANA is an accurate and consistent alignment tool for DNA sequences. ACANA is specifically designed for aligning sequences that share only some moderately conserved regions and/or have a high frequency of long insertions or deletions. It attempts...EMBOSS Apps
By Jit 3513 days agoemboss.sourceforge.net - The programs are listed in alphabetical order, Look at the individual applications or go to the GROUPS page to search by category. EMBASSY applications are described in separate documentation for each package. Applications in...zPicture: A dynamic blastz alignment visualization
By Archana Malhotra 2960 days agozpicture.dcode.org - zPicture is a dynamic alignment and visualization tool that is based on blastz alignment program utilized by PipMaker. zPicture alignments can be automatically submitted to rVista 2.0 to identify conserved transcription factor binding...SRF and JRF Bioinformatics at Tezpur University, Napaam
Applications are invited for the following temporary positions unde MHRD sponsored Centre of Excellence in the Department of Computer Science and Engineering (CSE), Tezpur University Qualification and Experience : Senior Research Fellow (SRF)...
