github.com - KAT is a suite of tools that analyse jellyfish hashes or sequence files (fasta or fastq) using kmer counts. The following tools are currently available in KAT:
hist: Create an histogram of k-mer occurrences from a sequence file. Adds metadata in...
Scientist B at AIIMS, New Delhi, Delhi
Overview
Applications are invited from eligible candidates for the following position under Meity funded research project entitled: Artifical Intelligence in Oncology, Harnsessing big data and advanced...
github.com - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation...
Contract Type: Fixed Term Contract
Work Hours: Full Time 40.0 Hours per Week
Location: Belval
Student and employee status (36 months studies programme, as per university standards) with project funding available for up to 48 months
36 months...
github.com - Juicebox is visualization software for Hi-C data. This distribution includes the source code for Juicebox, Juicer Tools, and Assembly Tools. Download Juicebox here, or use Juicebox on the web. Detailed documentation is...
Vienna Biocenter are seeking two postdoctoral researchers to join our team and work on the ERC funded project "METASCALE: Modes of genome evolution during major metazoan transitions". The task of both positions will be to study co-evolutionary...
github.com - wgd is a easy to use command-line tool for KS distribution construction named wgd. The wgd suite provides commonly used KS and colinearity analysis workflows together with tools for modeling and visualization, rendering these...
The Institut Pasteur de Côte d’Ivoire was created by the N°72511 law of July 27th, 1972 under the Presidency of his Excellency Felix Houphouët Boigny and Professor Jacques Monod, then Leading...
help.rc.ufl.edu - More at https://help.rc.ufl.edu/doc/Kmer
This also includes:
A2Amapper: ATAC, Assembly to Assembly Comparision tool:
Comparative mapping between two genome assemblies (same species), or between two different genomes (cross...