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Alignment-free sequence comparison tools available for next-generation sequencing data analysis
Last updated 2716 days ago by Abhimanyu Singh Comments (1)kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment for rapid determination of read compatibility with targets) Software (C++) https://pachterlab.github.io/kallisto/ Sailfish Estimation of isoform abundances...RA Bioinformatics at Ch. Charan Singh University, Meerut
Ch. Charan Singh University, Meerut http://molbiolabccsumrt.webs.com/ Applications are invited for one post of RA in a DBT funded research project “Creation of Bioinformatics Infrastructure Facility (BIF) for the promotion of Biology Teaching...Many-to-many pairwise alignments of two sequence sets
By Poonam Mahapatra 2492 days agoemboss.sourceforge.net - needleall reads a set of input sequences and compares them all to one or more sequences, writing their optimal global sequence alignments to file. It uses the Needleman-Wunsch alignment algorithm to find the optimum alignment (including gaps) of two...Coding Ground
By Jitendra Narayan 3682 days agowww.tutorialspoint.com - Online coding group for most of the programming languages. Code in almost all popular languages using Coding Ground. Edit, compile, execute and share your projects, 100% cloud. http://www.tutorialspoint.com/codingground.htmBioinformatics Project Assistant at NITW
NATIONAL INSTITUTE OF TECHNOLOGY WARANGAL – 506 004 DEPARTMENT OF BIOTECHNOLOGY No. NITW/Bio/ Date: 30th March 2015 ADVERTISEMENT FOR PROJECT FELLOW (Research Staff) Applications are invited for the post of Project Fellow (Research...Kalign: fast multiple sequence alignment program for biological sequences.
By BioStar 1992 days agogithub.com - Kalign is a fast multiple sequence alignment program for biological sequences. Align sequences and output the alignment in MSF format: kalign -i BB11001.tfa -f msf -o out.msf Align sequences and output the alignment in clustal format: kalign...Bioinformatics RA at IVRI
A walk in interview is scheduled in the seminar hall of Veterinary Biotechnology Division of the institute on 9.04.15 at 10.30 am for the engagement of one Research associate (RA) in ICAR funded time bound project entitled “Centre for Agricultural...AccessSyRI: finding genomic rearrangements and local sequence differences from whole-genome...
By Jit 1900 days agogithub.com - AccessSyRI: finding genomic rearrangements andlocal sequence differences from whole-genome assemblies SyRI, a pairwise whole-genome comparison tool for chromosome-level assemblies. SyRI starts by finding rearranged regions and then searches for...JRF Bioinformatics @ NATIONAL INSTITUTE OF IMMUNOLOGY NEW DELHI-110067
Applications are invited for the position of Junior Research Fellow (Project)/Senior Research Fellow (Project) for the following time-bound sponsored project as per the details given below: 1. “Development of bioinformatics methods for...RNA-Bloom: a fast and memory-efficient de novo transcript sequence assembler
By LEGE 1741 days agogithub.com - RNA-Bloom is a fast and memory-efficient de novo transcript sequence assembler. It is designed for the following sequencing data types: single-end/paired-end bulk RNA-seq (strand-specific/agnostic) paired-end single-cell RNA-seq...
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