Jit
Enthusiast computational biologist with business dream !!!
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Bioinformatics Trainee at University of Kalyani
Bioinformatics Trainee Eligibility : MSc Location : Kolkata Last Date : 28 Dec 2015 Hiring Process : Walk - In University of Kalyani Bioinformatics Trainee Job position in University of Kalyani Number of Posts : 02 Qualification : M.Sc....GenomeMapper: Simultaneous alignment of short reads against multiple genomes
By Jit 2996 days ago1001genomes.org - GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. It can be used to align against multiple genomes simulanteously or against a single...Chekulaevalab
Focusing on understanding the molecular mechanisms that regulate mRNA translation, localization and stability and role of non-coding RNAs in this process. Up to 90% of human DNA is estimated to be transcribed into so called non-coding RNAs that are...AlignQC: A tool for assessing an alignment, and generating reports that are easy to share
By Jit 2922 days agowww.healthcare.uiowa.edu - Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and rarefraction curve analysis. The most basic analysis only requires a BAM file, and outputs a web browser...RA at University of Pune
Research Associate Job vacancies in University of Pune on temporary basis No. of Post : 01 Department : Science and Technology Qualifications : Ph.D. with specialization in Bioinformatics/Machine Learning/ Mathematical Biology/...rHAT: a seed-and-extension-based noisy long read alignment tool
By Abhimanyu Singh 2875 days agogithub.com - rHAT is a seed-and-extension-based noisy long read alignment tool. It is suitable for aligning 3rd generation sequencing reads which are in large read length with relatively high error rate, especially Pacbio's Single Molecule Read-time (SMRT)...n50PlottingTools
By Jit 3832 days agogithub.com - Tools to create plots showing N-statistics for genome assemblies More at https://github.com/dentearl/n50PlottingToolsShouji: a fast and efficient pre-alignment filter for sequence alignment
By Jit 2468 days agogithub.com - The ability to generate massive amounts of sequencing data continues to overwhelm the processing capacity of existing algorithms and compute infrastructures. In this work, we explore the use of hardware/software co-design and hardware acceleration...flo
By Jitendra Narayan 3830 days agogithub.com - flo - same species annotations lift over pipeline Lift over is the process of transferring annotations from one genome assembly to another. Usually lift over is done because there is a new, improved genome assembly for the species and good quality...Caretta – A multiple protein structure alignment and feature extraction suite
By Rahul Nayak 2058 days agowww.bioinformatics.nl - Caretta – a multiple protein structure alignment and feature extraction suite Caretta, a multiple structure alignment suite meant for homologous but sequentially divergent protein families which consistently returns accurate alignments...
