Jit
Enthusiast computational biologist with business dream !!!
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Shouji: a fast and efficient pre-alignment filter for sequence alignment
By Jit 1847 days agogithub.com - The ability to generate massive amounts of sequencing data continues to overwhelm the processing capacity of existing algorithms and compute infrastructures. In this work, we explore the use of hardware/software co-design and hardware acceleration...Caretta – A multiple protein structure alignment and feature extraction suite
By Rahul Nayak 1437 days agowww.bioinformatics.nl - Caretta – a multiple protein structure alignment and feature extraction suite Caretta, a multiple structure alignment suite meant for homologous but sequentially divergent protein families which consistently returns accurate alignments...Scientist at Regional Medical Research Centre (ICMR), RMRC, Port Blair
Scientist Eligibility : MSc, M Phil / Phd, BE/B.Tech Location : Delhi Last Date : 08 Mar 2016 Hiring Process : Walk - In Regional Medical Research Centre - Notification Order No.1-51/Proj/RMRC/PB/ Scientist – II (Post Code:...Seal: SEquence ALignment evaluation suite
By Jit 2517 days agocompbio.case.edu - Seal is a comprehensive sequencing simulation and alignment tool evaluation suite. This software (implemented in Java) provides several utilities that can be used to evaluate alignment algorithms, including: Reading a pre-existing reference...svelter
By Jitendra Prajapati 3191 days agogithub.com - This software is designed to identify both simple and complex rearrangements from paired-end sequencing data. Users could ran it easily by just alling SVelter.py with proper parameters. It's also possible to ran it on multiple cores by...JRF at ICGEB
Vacancy Notice PU/TS/01-16 JRF jobs in International Centre for Genetic Engineering and Biotechnology Area of research: Computational analysis of protein-protein interactions and metabolic reconstruction of pathways Qualification : Suitable...Program Officer, Bioinformatics at Jhpiego
Jhpiego is a non-profit global health leader and Johns Hopkins University affiliate that is saving lives, improving health, and transforming futures. We partner with governments, health experts, and local communities to build the skills and systems...Ph.D. Programme in Computational Biology
Ph.D. Programme in Computational Biology For students interested in frontier research at the interface of biology, computation, physics and applied mathematics IMSc is a leader in India in fundamental research in theoretical physics,...Trimmomatic: A flexible read trimming tool for Illumina NGS data
By Jit 3145 days agowww.usadellab.org - Paired End: java -jar trimmomatic-0.35.jar PE -phred33 input_forward.fq.gz input_reverse.fq.gz output_forward_paired.fq.gz output_forward_unpaired.fq.gz output_reverse_paired.fq.gz output_reverse_unpaired.fq.gz ILLUMINACLIP:TruSeq3-PE.fa:2:30:10...Venn Diagrams on R Studio
By Jitendra Prajapati 3135 days ago Comments (2)rstudio-pubs-static.s3.amazonaws.com - First step: Install & load “VennDiagram” package. # install.packages('VennDiagram') library(VennDiagram) Second step: Load data Add filepath if “catdoge.csv” is not in working-directory. d <-...
