BOL

github.com - Just import the assembly, bam and ALE scores. You can convert the .ale file to a set of .wig files with ale2wiggle.py and IGV can read those directly.  Depending on your genome size you may want to convert the .wig files to the BigWig format.

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To find repeats in a genome from 2 to 9 length using a Perl script, you can use the RepeatMasker tool with the "--length" option[0]. Here's a step-by-step guide: Install RepeatMasker: First, you need to install RepeatMasker on your system. You...

Research Associate (RA) under Network Project on Agricultural Bioinformatics Name of the Project : Network Project on Agricultural Bioinformatics Number of positions One Qualifications : Ph.D Degree in Bioinformatics/Biotechnology/...

FASTA VALIDATOR + SEQKIT RMDUP: FASTA validation GENOMETOOLS GT GFF3VALIDATOR: GFF3 validation ASSEMBLATHON STATS: Assembly statistics GENOMETOOLS GT STAT: Annotation statistics NCBI FCS ADAPTOR: Adaptor contamination pass/fail NCBI...

Walk-in-interview will be held on 23 February, 2015 at 11.00 a.m. for the following temporary positions in the DBT (U-EXCEL) sponsored project entitled “Sequencing genomes of some bacteria that invade/resides in tomato plant” under the Principal...

chagall.med.cornell.edu - Institute of computational biomedicine, Cornell University provide an NGS workshop tutorial at http://chagall.med.cornell.edu/NGScourse/  You can also add your favourite NGS educational material, or workshop tutorial by commenting on this...

No. ACTREC/Advt./ 7 /2015 Title of the Project Research Associate (One position) DBTs Biotechnology/Bioinformatics training centre PI Dr. Ashok Varma Duration of the Project Six Months from the date of appointment, can be extended...

www.nature.com - Second generation sequencing has revolutionized genomic studies. However, most genomes contain repeated DNA elements that are longer than the read lengths achievable with typical sequencers, so the genomic order of several generated contigs cannot...

Be proficient in LINUX, know perl or python, understand biology and Next Generation Sequencing. The intern will port Agile Assay Design pipelines into Galaxy. The intern will also learn to develope his/her own bioinformatics pipelines for PCR or...