Jit
Enthusiast computational biologist with business dream !!!
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XAMPP: Starting Apache fail Ubuntu
By Ram Yash Pal 4503 days ago Comments (1)Just press Ctrl+Alt+T on your keyboard to open Terminal. When it opens, run the command(s) below:Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads
By Rahul Nayak 2908 days agosourceforge.net - Rainbow is developed to provide an ultra-fast and memory-efficient solution to clustering and assembling short reads produced by RAD-seq. First, Rainbow clusters reads using a spaced seed method. Then, Rainbow implements a heterozygote calling like...Genomic Medicine - Bruce Korf (2014)
By Neel 4486 days agoMay 21, 2014 - Current Topics in Genome Analysis 2014 A lecture series covering contemporary areas in genomics and bioinformatics. More: http://www.genome.gov/COURSE2014Flye: Fast and accurate de novo assembler for single molecule sequencing reads
By Rahul Nayak 2649 days agogithub.com - Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The...Faculty Positions at Central University of Punjab
Faculty Positions: Rolling/Open Advertisement Advt.No: T-10 (2013) Pay Scale: Pay Band Rs.15600-39100 with AGP of Rs.6,000/- Essential Qualifications for Professors, Associate Professors, and Assistant Professors: As per “UGC REGULATIONS ON...Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
By Jit 2430 days agogithub.com - Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the architectural advances that have proven successful in image classification. Unlike...Integrative Genomics Viewer (IGV) tutorial
By Neel 4468 days agowikis.utexas.edu - The Integrative Genomics Viewer (IGV) from the Broad Center allows you to view several types of data files involved in any NGS analysis that employs a reference genome, including how reads from a dataset are mapped, gene annotations, and predicted...mixtureS: a novel tool for bacterial strain reconstruction from reads
By BioStar 2236 days agowww.cs.ucf.edu - mixtureS that can de novo identify bacterial strains from shotgun reads of a clonal or metagenomic sample, without prior knowledge about the strains and their variations. Tested on 243 simulated datasets and 195 experimental datasets, mixtureS...COSMOS, our workflow management system for NGS data
By Jit 4457 days agocosmos.hms.harvard.edu - COSMOS, our Python-based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS" sequencing data is open-access published via Advance Access in Bioinformatics (Gafni et al....National Center for Bioinformatics (NCB)
NCB is offering M.Phil and Ph.D programs in the area of Bioinformatics. The major goal of NCB is to promote quality training and research in the area of Bioinformatics. Bioinformatics originated as a cross-disciplinary field as the need for...
