Radha Agarkar
A Bioinformatician
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Internship program with ArrayGen Technolgies
Internship Program for Bioinformatics / Biotechnology Professionals Currently we offer positions to outstanding students interested in Next Generation Sequencing (NGS) data analysis. Applications are accepted throughout the year. Accepted students...Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads
By Rahul Nayak 2930 days agosourceforge.net - Rainbow is developed to provide an ultra-fast and memory-efficient solution to clustering and assembling short reads produced by RAD-seq. First, Rainbow clusters reads using a spaced seed method. Then, Rainbow implements a heterozygote calling like...JRF at NATIONAL RESEARCH CENTRE ON PLANT BIOTECHNOLOGY
NATIONAL RESEARCH CENTRE ON PLANT BIOTECHNOLOGY New Delhi-110012 Walk in interview Eligible candidates may appear for Walk-in interview for the temporary positions of JRF/SRF/ RA, in ICAR, DBT funded research projects. Positions are purely...Flye: Fast and accurate de novo assembler for single molecule sequencing reads
By Rahul Nayak 2671 days agogithub.com - Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The...Guest Lecturer - Molecular Biology & Bioinformatics
Adv. No. F.TU/ACA/GT-APP/01/14 Date: 07.07.2014 Faculty of Science Essential Qualifications: (i) Good academic record having at least 55% marks (or an equivalent grade in a point scale wherever grading system is followed) at the Master’s...Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
By Jit 2452 days agogithub.com - Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the architectural advances that have proven successful in image classification. Unlike...mixtureS: a novel tool for bacterial strain reconstruction from reads
By BioStar 2258 days agowww.cs.ucf.edu - mixtureS that can de novo identify bacterial strains from shotgun reads of a clonal or metagenomic sample, without prior knowledge about the strains and their variations. Tested on 243 simulated datasets and 195 experimental datasets, mixtureS...Assistant Professor - Medical Bioinformatics
Advt. No : ME-I/A-IV/03/14 No.of Posts:01 (SC) Pay Scale: Pay Band of Rs.15600-39100 + Rs.6000/- GP +NPA @ 25% of Basic Pay +Learning Resource Allowance @ Rs.20,000/-P.A.+ Conveyance Allowance @ Rs. 1650/-P.M.+ Academic Allowance @...The 5 reasons to mistakes at bioinformatics work !!!
By Jit 4479 days agoWhen you're just starting out with biological programming, it's easy to run into complex problems that make you wonder how anyone has ever managed to write a program.SqueezeMeta: a fully automated metagenomics pipeline, from reads to bins
By BioStar 844 days agogithub.com - SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. SqueezeMeta includes multi-metagenome support allowing the co-assembly of related metagenomes and the retrieval of individual genomes...
