Abhimanyu Singh
A bioinformatics beginner
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Step-by-Step Guide to Running Genome Assembly
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By Rahul Nayak 1720 days agowiki.bits.vib.be - compare two BWA mapping methods with the online hg18-mapped data We first operate a rapid inspection of the different BAM files using samtools flagstat. Illumina provided chr21 read mapping obtained with their GA IIx deep...Smudgeplot: Inference of ploidy and heterozygosity structure using whole genome sequencing data
By Neel 1683 days agogithub.com - This tool extracts heterozygous kmer pairs from kmer count databases and performs gymnastics with them. We are able to disentangle genome structure by comparing the sum of kmer pair coverages (CovA + CovB) to their relative coverage (CovB / (CovA +...Update Genome Workbench 2.7.15 released
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By Martin Jones 4348 days agoUser-friendly tools for the normalization and visualization of deep-sequencing data
