Suppose we wanted to do something with all this BLAST output. Generally, that’s the case - you want to retrieve all matches, or do a reciprocal BLAST, or something.
As with most programs that run on UNIX, the text output is in some specific...
NATIONAL BUREAU OF ANIMAL GENETIC RESOURCES
Near Basant Vihar G.T. Road Bypass
P.O. Box No.129, Karnal-132001 (Haryana)
WALK-IN-INTERVIEW
A walk-in-Interview is proposed to be held at National Bureau of Animal Genetic Resources, Karnal...
The major research interests are in exploring the role of extracellular matrix components (soluble secreted proteins and membrane vesicles) in cancer and intercellular communication. The lab integrates proteomic, genomic and bioinformatics...
Applications are invited from the citizens of India for filling up the following temporary position for the sponsored project undertaken in the Department of Biosciences and Bioengineering of this Institute. The position is temporary initially for a...
The Basic Local Alignment Search Tool (BLAST) is a powerful bioinformatics program used to compare an input sequence (such as DNA, RNA, or protein sequences) against a database of sequences to find regions of similarity.
Benefits for the participants
- Plan more efficient experiments
- Correctly interpret results
- Communicate results in publications more effectively
The course focus is on methodologies, not on particular software tools. After the course...
www.repeatmasker.org - RMBlast is a RepeatMasker compatible version of the standard NCBI blastn program. The primary difference between this distribution and the NCBI distribution is the addition of a new program "rmblastn" for use with RepeatMasker and...
In a lot of my work in bioinformatics, I have been using hidden Markov models (HMMs). As a postdoc with David Haussler at UCSC we developed the so-called profile HMMs (refs). Since then I have applied HMMs to membrane proteins (refs) and gene...
kablammo.wasmuthlab.org - Kablammo helps you create interactive visualizations of BLAST results from your web browser. Find your most interesting alignments, list detailed parameters for each, and export a publication-ready vector image, all without installing any...