The bakers yeast, Saccharomyces cerevisiae is an ideal model organism to understand mechanisms of meiotic chromosome segregation. In S. cerevisiae and in mammals, the majority of meiotic crossovers are formed through a highly conserved MSH4p-MSH5p,...
http://prodigal.ornl.gov/ - Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program developed at Oak Ridge National Laboratory and the University of Tennessee. Key features of Prodigal...
http://biogps.org/ - BioGPS opened 2016 with a publication in Nucleic Acids Research, right after the New Year holiday. Throughout the year, new designs for the site were being created, reviewed, adjusted, reviewed, adjusted, and more review/adjustments in anticipation...
bioinformatics.sdstate.edu - 2/3/2020: Now published by Bioinformatics.
11/3/2019: V 0.61, Improve graphical visualization (thanks to reviewers). Interactive networks and much more.
5/20/2019: V.0.60, Annotation database updated to Ensembl 96. New bacterial and fungal...
gitlab.com - CrowdGO is a protein Gene Ontology predictor using a meta approach, analyzing the predictions of other tools in order to get an improved precision and recall.
Please note that the CrowdGO snakemake workflow is currently only tested on Ubuntu. It...
github.com - With the EGAD (Extending ‘Guilt-by-Association’ by Degree) package, we present a series of highly efficient tools to calculate functional properties in networks based on the guilt-by-association principle. These allow rapid controlled...
http://wilkox.org/gggenes - Install the stable version of gggenes from CRAN:
install.packages("gggenes")
If you want the development version, install it from GitHub:
devtools::install_github("wilkox/gggenes")
More at https://github.com/wilkox/gggenes
github.com - The GenomeQC web application is implemented in R/Shiny version 1.5.9 and Python 3.6 and is freely available at https://genomeqc.maizegdb.org/ under the GPL license. All source code and a containerized version of the GenomeQC pipeline is...
One of the landmark events of 20th century science was celebrated and reinterpreted for the 21st century in Trinity College Dublin on 12 July 2012 as part of the Science in the City programme of ESOF2012. Dr Craig Venter, one of the leaders of the...