BOL

Evolution of the adaptive immune system Marsupial and monotreme immune genes MHC Diversity and Conservation Marsupial and monotreme genomics Comparative Genomics Genetics of Tasmanian Devil facial tumour disease More at...

We focus on fundamental questions in genomics, ecology, and evolution. Our methods include fieldwork and labwork, but most of our time is spent analyzing genomics data using computational biology approaches. Ant / bacteria co-evolution, landscape...

Environnement de travail (Work environment): The successful candidate will join a dynamic research group working on the ecology and evolution of host'parasite'environment interactions in non-model organisms, particularly snail vectors and its...

www.oreilly.com - BioCoder features: Novel therapeutic discovery strategies Hardware such as low-cost lab equipment or diagnostics Open or low­-cost bioinformatics tools Engineered organisms for the production of small molecules, biologics, or other...

ENCODE 3 A collection of research articles and related content describing the Encyclopedia of DNA Elements, its datasets and tools.

The laboratory works on genome sequencing, immunoproteogenomics, antibiotics sequencing, and comparative genomics - computational technologies that enabled new applications and allowed scientists to attack biological problems that remained beyond...

omega.omicsbio.org - Omega found overlaps between reads using a prefix/suffix hash table. The overlap graph of reads was simplified by removing transitive edges and trimming short branches. Unitigs were generated based on minimum cost flow analysis of the overlap graph...

github.com - Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream...

github.com - MashMap is a fast and approximate software for mapping long reads (PacBio/ONT) or assembly to reference genome(s). It maps a query sequence against a reference region if and only if its estimated alignment identity is above a specified threshold. It...

www.ncbi.nlm.nih.gov - RGFA, an implementation of the proposed GFA specification in Ruby. It allows the user to conveniently parse, edit and write GFA files. Complex operations such as the separation of the implicit instances of repeats and the merging of linear paths can...