Jit
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MAGIC: A tool for predicting transcription factors and cofactors driving gene sets using ENCODE data
By BioStar 2025 days agogithub.com - The algorithm presented herein, Mining Algorithm for GenetIc Controllers (MAGIC), uses ENCODE ChIP-seq data to look for statistical enrichment of TFs and cofactors in gene bodies and flanking regions in gene lists without...InteractiVenn: a web-based tool for the analysis of sets through Venn diagrams
By Jit 1445 days agowww.interactivenn.net - InteractiVenn, a more flexible tool for interacting with Venn diagrams including up to six sets. It offers a clean interface for Venn diagram construction and enables analysis of set unions while preserving the shape of the diagram. Set unions are...HELIANO: A fast and accurate tool for detection of Helitron-like elements
By LEGE 669 days agogithub.com - Helitron-like elements (HLE1 and HLE2) are DNA transposons. They have been found in diverse species and seem to play significant roles in the evolution of host genomes. Although known for over twenty years, Helitron sequences are still challenging...
