catchenlab.life.illinois.edu - Chromonomer is a program designed to integrate a genome assembly with a genetic map. Chromonomer tries very hard to identify and remove markers that are out of order in the genetic map, when considered against their local assembly order; and to...
github.com - Structural variant comparison tool for VCFs
Given benchmark and comparsion sets of SVs, calculate the recall, precision, and f-measure.
Spiral Genetics
Motivation
Pune University Recruitment 2015 – Project Asst Posts: Savitribai Phule Pune University has given a notification for the recruitment of Project Assistant vacancies for the project entitled “Molecular Characterization of Organisms for Therapeutic...
github.com - Clustergrammer is a web-based tool for visualizing high-dimensional data (e.g. a matrix) as an interactive and shareable hierarchically clustered heatmap. Clustergrammer's front end (Clustergrammer-JS) is built using D3.js and its back-end...
This tutorial is intended to introduce users quickly to the basics of R, focusing on a few common tasks that biologists need to perform some basic analysis: load a table, plot some graphs, and perform some basic statistics. More...
github.com - jumboDB tool for fast de Bruijn graph construction from long sequences (reads or genomes) with very low error rate. JumboDB is not a genome assembler by itself but rather a subroutine that translates a set of reads into compressed de Bruijn...
The institute has evolved over the years into a multi-disciplinary research organization with stress on fundamental research in its pursuit of advancement of knowledge in Science and technology and at the same time developing highly competent and...
github.com - NGenomeSyn: an easy-to-use and flexible tool for publication-ready visualization of syntenic relationships across multiple genomes
NGenomeSyn [multiple (N) Genome Synteny], for publication-ready visualization of syntenic relationships of...
F. No.: 2-19/2011-Adm.I
Research Associate Biotechnology /JRF / Lab. Assistant recruitment in Indian Institute of Vegetable Research
Project:
Genomics assisted selection of Solanum chilense introgression lines for enhancing drought...