BOL

Linux Commands Cheat Sheet    File System    ls — list items in current directory    ls -l — list items in current directory and show in long format to see perimissions, size, an modification...

instructions successfully build Bandage on a fresh installation of Ubuntu 14.04

It's been a while since I last installed BLAT and when I went to the download directory at UCSC: http://users.soe.ucsc.edu/~kent/src/ I found that the latest blast is now version 35 and that the code to download was: blatSrc35.zip....

commands

Each year, INRAE organises open competitions to recruit research scientists on permanent positions. The recruitment campaign is generally aimed at researchers who have recently obtained their PhD. Candidates are recruited on the basis of their...

Some PhD students are organizing a summer school open to PhD students with different backgrounds and interests. Several sessions and workshops will be held within five focus groups, and one common theme: mountain research. The summer school...

ImageMagick builds on a variety of Unix and Unix-like operating systems including Linux, Solaris, FreeBSD, Mac OS X, and others.

github.com - A program to detect recombination hotspots using population genetic data. More at https://github.com/auton1/LDhot

http://rast.nmpdr.org/ - The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard software pipeline for identifying genomic features (i.e., protein-encoding genes...

journals.plos.org - MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a reference genome. Uniquely among current mapping tools, MOSAIK can align reads generated by all the major sequencing technologies,...