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chromoMap-An R package for Interactive visualization and mapping of human chromosomes
By Rahul Nayak 2341 days ago Comments (1)An R package for Interactive visualization and mapping of human chromosomes
Applied Statistics for Bioinformatics using R
By Neel 2276 days agoThe purpose of this book is to give an introduction into statistics in order to solve some problems of bioinformatics. Statistics provides procedures to explore and visualize data as well as to test biological hypotheses. The book intends to be...regioneR: an R package for the management and comparison of genomic regions
By Jit 2172 days agogattaca.imppc.org - Regioner is an R package for the management and comparison of genomic regions. It offers a set of function for basic manipulation of region sets extending the functionality of GenomicRanges and a powerful and customizable permutation test framework....chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
By Neel 2050 days agocran.r-project.org - Provides interactive, configurable and elegant graphics visualization of the chromosomes or chromosome regions of any living organism allowing users to map chromosome elements (like genes, SNPs etc.) on the chromosome plot. It introduces a special...alluvial diagram
By Jit 1888 days agocran.r-project.org - Alluvial diagram is a variant of a Parallel Coordinates Plot (PCP) but for categorical variables. Variables are assigned to vertical axes that are parallel. Values are represented with blocks on each axis. Observations are represented...EFS: an ensemble feature selection tool implemented as R-package and web-application
By Jit 1759 days ago Comments (1)http://efs.heiderlab.de/ - The software EFS (Ensemble Feature Selection) makes use of multiple feature selection methods and combines their normalized outputs to a quantitative ensemble importance. Currently, eight different feature selection methods have been integrated in...Postdoctoral scientist genome analytics/ genome bioinformatics (m/f/*)
https://www.uksh.de/jobs/Stellenangebote-nr-20190570-p-8.html Your profile: Degree in bioinformatics, biostatistics, or equivalent Experience in the processing and analysis of large-scale genomics data using compute clusters / high-performance...QuasR: Quantification and annotation of short reads in R
By Neel 1196 days agowww.bioconductor.org - The QuasR package (short for Quantify and annotate short reads in R) integrates the functionality of several R packages (such as IRanges (Lawrence et al. 2013) and Rsamtools) and external software (e.g. bowtie, through the Rbowtie package, and...ReConPlot: an R package for the visualization and interpretation of genomic rearrangements
By LEGE 343 days agoacademic.oup.com - ReConPlot (REarrangement and COpy Number PLOT), an R package that provides functionalities for the joint visualization of SCNAs and SVs across one or multiple chromosomes. ReConPlot is based on the popular ggplot2 package, thus allowing...
